Parageobacillus toebii NBRC 107807: DER53_09650
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Entry
DER53_09650 CDS
T06505
Name
(GenBank) stage V sporulation protein D
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
ptb
Parageobacillus toebii NBRC 107807
Pathway
ptb00550
Peptidoglycan biosynthesis
ptb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ptb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DER53_09650
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ptb01011
]
DER53_09650
Peptidoglycan biosynthesis and degradation proteins [BR:
ptb01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
DER53_09650
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
YycC
Motif
Other DBs
NCBI-ProteinID:
QIQ33025
UniProt:
A0A6G9J2U2
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All DBs
Position
1857565..1859505
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AA seq
646 aa
AA seq
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MRVSHVTVRKRLMIVFLVGVFIFAIIDIRLGYVQFILGDMLTERAKDSWSRNIPFEPKRG
EILDRNGVPLATNMSAPTVYVIPRQIENPAETAEKLAKVLNMPVEKAYKHITKKTSIERI
PEGRKISNEKAKEIRALGLKGVYIAEDTKRYYPFGSYLSHVLGFTGIDNQGLMGLELYYD
KELSGQRGSVQFYSDAKGKRMPNMADDYTPPTDGLNLVLTIDSRIQTIVERELDIAEAKY
NPDGIIAVAMNPNTGEILAMASRPTFDPANYRNVPAEIYNRNLPIWSTYEPGSTFKIITL
AAALEEKKVNLLKDHFYDPGYVKVAGATLRCWKKGGHGSQTFLEVVQNSCNPGFVELGER
LGKEKLFHYIKEFGFGEKTGIDLQGEGTGILFDLKRVGPVEQATTAFGQGVSVTPIQQVA
AVSAAVNGGILYTPYIAKQWVDPETGKVVSRNTLKAKRRVISEETSKQIRYALESVVAQG
TGKGAYVEGYRVGGKTGTAQKAKGGRYLKDNHIVSFIGFAPADDPQLVVYVAVDNPKGTV
QFGGVVSAPIVGKIMEDSLRTLGVKPRKGQIEKERAWNDPKMVEVPNLIGLSKKDLQEQL
FNLKLDVSGEGDVVIEQAPEPGVKVKEGSTIRIYLASKTSSKKEVR
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtttcccacgtcactgtccgcaaacggctaatgatcgtgtttctagttggggtg
tttatttttgcgattattgacattcgtctcggatatgttcaatttatattaggtgatatg
ttaacagaaagagcgaaagattcatggagccgaaatattccatttgagccgaagcgcgga
gaaattttggatcgcaatggcgttccgctcgctacgaatatgagcgctccaacagtatac
gtcattccgcgccagattgaaaatccggccgagacggcagaaaagttagcgaaagtgtta
aatatgcccgtcgaaaaagcgtataaacatattacgaaaaaaacgtcgatcgagcgcatt
ccagaaggtaggaaaatatcgaatgaaaaagcaaaagaaattcgggcactcggcttaaaa
ggggtatatatcgcggaagatacgaaacgttattatccgttcggcagttatttgtcccat
gttttaggatttaccggcatcgataaccagggcttgatgggattagagctctattatgat
aaagaattgagcggtcaacgcggttcggtgcaattttattcggacgcaaaaggaaaaaga
atgcctaatatggcagatgattatacgccgccaacagatgggttaaatttggtgcttacg
attgattcgcgtatccaaacaatcgtggagcgggaactcgatattgccgaagcaaagtat
aatccagacggcattattgcagttgcaatgaacccgaatacgggagaaattttggcaatg
gcgagccgtccaacatttgacccggcaaactatcgaaacgtcccagcggaaatttataac
cgcaacttgccgatttggagtacgtatgaacctggttcgacgtttaaaattattacgctt
gctgcggcgttggaagaaaaaaaagtaaatttattgaaagatcatttttatgatccagga
tatgtaaaagttgccggtgcaacattacgttgctggaaaaaaggcgggcatggatcgcaa
acttttttagaagttgtgcaaaactcttgtaacccaggttttgtagagttaggggaacgc
cttgggaaagaaaaattgtttcactacattaaggagtttggctttggtgaaaaaacaggc
attgacttgcagggggaaggaaccggaattttatttgatttgaaacgcgttgggcctgtc
gaacaagcaacaacggcctttgggcaaggggtgtcggtgacaccgattcagcaagtggca
gctgtttctgcggcagtaaatggtggaattttgtacacgccatatattgcgaagcaatgg
gttgatcctgaaacaggaaaggtagtaagccgcaatacactaaaggcgaagcgacgcgtt
atttccgaggaaacgtcgaaacaaattcgttatgctctagagagcgttgttgcacaaggg
acaggaaaaggtgcctatgtagaagggtatcgtgttggcggaaaaacaggaacagcacaa
aaagcgaaaggcggccgatatttaaaagataatcatatcgtttcttttatcggatttgca
ccggcggatgacccacagcttgtcgtttatgttgctgtcgacaatccgaaaggaacggtt
caattcggtggtgtcgtctctgctccaatcgtcggaaaaattatggaggatagtctacgt
acacttggcgtgaaaccacgcaaaggccaaatagaaaaagaacgggcgtggaatgatccg
aaaatggtcgaagttccaaatttaatcggcttatcaaaaaaagacttgcaagagcaactt
tttaacttaaaattagatgttagtggagaaggtgatgttgttattgagcaagctccagaa
cctggggtgaaagtgaaagaaggttccactattcgcatttacttagcatcaaagacgtct
tctaaaaaagaagttcgatga
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