Parageobacillus toebii NBRC 107807: DER53_09780
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Entry
DER53_09780 CDS
T06505
Name
(GenBank) RluA family pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
ptb
Parageobacillus toebii NBRC 107807
Brite
KEGG Orthology (KO) [BR:
ptb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptb03009
]
DER53_09780
Enzymes [BR:
ptb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
DER53_09780
Ribosome biogenesis [BR:
ptb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DER53_09780
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
CACHD1_mid
IRX15_IRX15L_GXM
Motif
Other DBs
NCBI-ProteinID:
QIQ33049
LinkDB
All DBs
Position
1882554..1883468
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AA seq
304 aa
AA seq
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MDVIQFHIDAEYDNERIDKVIAALNEEWSRSKVQQWIKDGLVTVNDQHVKANYKSSAGDV
VVVRLPEPEPLHVVPENIPLDIYYEDADVLVVNKPRGMVVHPAPGHMRGTLVNALLAHCT
DLSGINGVLRPGIVHRIDKDTSGLLMVAKNDMAHQSLVDQLVKKTVTRKYKAIVHGVIPH
DYGTIDAPIGRDKRDRKKMTVTEENGKEAVTHFRVLERFRHYTFVECQLETGRTHQIRVH
MKYIGYPLAGDPQYGPKKTLPIDGQALHAGVLGFTHPRTGEYLEFEAPLPPEFEHLLQLL
RKGD
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggatgttattcaatttcatattgatgcggaatacgacaatgaacggattgataaagtg
attgcagcattaaatgaagaatggtctcgttccaaagtgcagcaatggataaaagatggg
cttgtcaccgttaacgatcagcatgtcaaagcgaattacaagagttcagccggcgatgtc
gttgtcgttcgccttccggaaccggagccgcttcatgtcgtgccagagaatattccgtta
gatatttattacgaggatgctgatgttcttgttgtcaataaaccgcgcggcatggtcgtt
cacccagcaccagggcatatgcgcggcacgctcgtaaacgccttgcttgcccattgcacc
gatttatcaggcattaacggagtgcttcgtccgggtattgtgcatcgcattgataaagat
acatctggattattgatggttgccaaaaacgatatggcgcaccagtcgcttgtcgatcaa
cttgtgaaaaaaacggtgacgcgaaaatataaagcgattgttcatggagtaattccacac
gattacggcacgattgacgcgccgatcggccgcgataaacgagatcgtaaaaaaatgacg
gtaacagaagaaaacggaaaagaggcggtcactcatttccgtgtgttagaacgttttcgc
cactatacgtttgtcgaatgccaattagaaacaggaagaacccatcaaattcgcgtgcat
atgaaatatattggctatccgttagcgggcgatccgcaatacggaccgaaaaagacgctg
ccaattgacgggcaggctttacatgcaggagtgctcggatttacccatccgcgcaccgga
gaatatttggagtttgaggcgccacttccgcctgagtttgagcatcttttacaattgttg
cgaaaaggtgattga
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