Parageobacillus toebii NBRC 107807: DER53_09810
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Entry
DER53_09810 CDS
T06505
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
ptb
Parageobacillus toebii NBRC 107807
Pathway
ptb00220
Arginine biosynthesis
ptb00240
Pyrimidine metabolism
ptb00250
Alanine, aspartate and glutamate metabolism
ptb01100
Metabolic pathways
ptb01110
Biosynthesis of secondary metabolites
ptb01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
ptb00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
DER53_09810 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
DER53_09810 (carB)
00220 Arginine biosynthesis
DER53_09810 (carB)
Enzymes [BR:
ptb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
DER53_09810 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATP-grasp_3
GARS_A
ATPgrasp_Ter
ATP-grasp_5
RimK
ATP-grasp_4
ATP-grasp_2
DUF5305
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
QIQ33055
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All DBs
Position
1889080..1892277
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AA seq
1065 aa
AA seq
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MPKRQDIETILVIGSGPIVIGQAAEFDYAGTQACLALKEEGYKVILVNSNPATIMTDTEI
ADKVYMEPLTLEFVSRIIRKERPDAILPTLGGQTGLNLAVELARTGVLAECGVEILGTKL
EAIEKAEDREQFRALMNELGEPVPESEIIHSLEEAYAFVEKVGYPVIVRPAFTLGGTGGG
ICKNEEELIDIVSTGLKLSPVHQCLLEKSIAGYKEIEYEVMRDANDNAIVVCNMENIDPV
GIHTGDSIVVAPSQTLSDREYQLLRNASLRIIRALGIEGGCNVQLALDPHSFHYYVIEVN
PRVSRSSALASKATGYPIAKLAAKIAVGLTLDEMINPVTGKTYACFEPTLDYVVTKIPRF
PFDKFESANRRLGTQMKATGEVMAIGRTLEESLLKAVRSLETNVYHLELKDAENVSDELI
EKRIRKAGDERLFYIAEALRRGFTVEQIHEWSQIDRFFLTKIENIVRFENVVRDYKGDIE
VLRKAKEMGFSDVAIAKLWNKSERDVYEMRKQAGIIPVYKMVDTCAAEFESETPYYYSTY
EDENESVVTDRESVVVLGSGPIRIGQGIEFDYATVHSVWAIKEAGYEAIIINNNPETVST
DFSISDKLYFEPLTIEDVMHVIDLEKPIGVIVQFGGQTAINLAAELAARGVRILGTSLED
LDRAEDRDKFEQTLSELGIPQPQGKTAFSVEEAVRIAEEIGYPVLVRPSYVLGGRAMEIV
YQEEELLHYMEHAVKVNPQHPVLIDRYLIGKEIEVDAISDGETVFIPGIMEHIERAGVHS
GDSIAVYPPQTLTEDIKQKIVDYTIKLARGLRIVGLLNIQFVMYQGEVYVLEVNPRSSRT
VPFLSKITNVPMANIATKVILGAKLAELGYETGLRQESEGVYVKAPVFSFAKLRNVDISL
GPEMKSTGEVIGKDVTFEKALYKGLVASGIHIRPYGAVLLTVADKDKEDAIELARRFYQI
GYQLLATNGTAEALKAADIPVTVVNKIHSASPNILDVIRQGKAQVVINTLTKGKQPESDG
FRIRREAVENGIPCLTSLDTAKAMLQVIESMTFSTTAMTQGMVRV
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaacgccaagacattgaaacgattttagtgatcggttccggcccgattgtcatc
ggccaggcggcggagtttgattatgcgggcacacaggcatgtttggcgctaaaggaagaa
ggatacaaagttattttagttaactccaatccagcaacgattatgaccgatacggaaatt
gccgacaaagtatatatggagccgctcacgctcgaattcgtttctcgcattatccgcaaa
gaacgtccggacgcgattttgccgacacttggcggacagactgggctaaacttggcggtc
gagcttgctagaacgggggtgctcgcagaatgcggcgttgaaattttaggaacaaaatta
gaagcaattgaaaaagcggaagaccgcgaacaatttcgcgcgctcatgaacgaacttggc
gaaccggttccggaaagcgaaattattcatagcttggaagaagcatacgctttcgtggaa
aaggtcggctatccggttatcgtccgcccggcgtttacgctcggcggcactggcggcggc
atttgcaaaaacgaggaagaattgatcgatatcgtttctactgggttaaaactaagccct
gttcatcaatgcttgctagaaaaaagcatcgcgggctataaagaaatcgagtatgaagtg
atgcgcgacgccaacgataacgcgatcgtcgtctgcaatatggaaaatatcgatccggtc
ggcattcacaccggcgattcgatcgtcgtcgctccaagccaaacgctaagcgaccgcgaa
tatcaattgctgcgcaacgcgtcgctaagaatcattcgcgctcttggcatcgaaggcggc
tgcaacgtgcagctggcgctcgatccgcatagcttccattactacgttattgaagtcaac
ccgcgcgtcagccgctcatcggcgttagcgtcgaaagcgacgggctatccgattgccaag
ctcgccgcgaaaattgccgttggcttaacgttagatgaaatgattaacccggtgacagga
aaaacgtacgcctgttttgaaccaacgctcgattacgttgtgacgaaaattccgcgcttt
ccgttcgataaattcgaatcggccaaccgccgtcttggcacgcaaatgaaagccacaggc
gaagtgatggcgatcggacggacgctagaagagtcactgttaaaagcggttcgctccctt
gagacgaacgtctaccatctcgaacttaaagatgccgaaaatgtatcagatgagttaatc
gaaaagcggattcgcaaagcgggagatgaacgcctcttctatattgccgaggcgcttcgc
cgcggttttactgtcgagcaaattcacgagtggagccaaattgaccgatttttcttaacc
aaaatcgaaaacatcgtccgctttgaaaacgttgttcgtgactataagggggatatcgaa
gtactgcgaaaagcgaaagaaatgggcttttccgatgtcgccatcgccaagctttggaac
aagagtgagcgcgatgtgtatgagatgcgcaaacaagcaggaatcattcctgtatataaa
atggtggatacatgcgcggcggaatttgaatcagaaacgccgtattactacagcacgtac
gaagacgaaaacgaatcggtcgtcaccgaccgagaaagcgtcgttgtgctcggctcagga
ccaattcgcatcgggcaagggattgaattcgattatgcgaccgttcattcggtctgggcg
attaaagaagcgggctatgaggcgattattatcaacaacaatccggaaacggtgtcgacc
gacttcagcatatcggacaaattatatttcgagccgttaaccattgaagatgtgatgcat
gtcattgatttagaaaagccgatcggggttatcgtgcaattcggcggccagacggcaatc
aacttggcggccgaattagcggcgcgaggcgtccgcattttaggaacgtcgcttgaggac
ttagaccgcgccgaagaccgtgacaaatttgaacaaacgttatcggagctaggcattccg
cagccgcaaggaaaaacggcattttccgtcgaggaagcggtgcggattgctgaggaaatc
ggctatccggtgcttgttcgtccatcgtatgttcttggcggccgcgcaatggaaatcgtg
tatcaagaagaagagctattgcactacatggagcacgccgtcaaagtgaacccgcagcat
ccggttctcatcgatcgttatttaatcggaaaagaaatcgaggtggatgcgatttctgac
ggagaaacggtgtttatcccgggaattatggaacatatcgaacgggcgggcgtgcattcc
ggcgactcgattgccgtttatccgccgcaaacgttaacggaggacatcaagcaaaaaatc
gtcgattacacgattaaattggcaagaggattgcgcattgttggattattgaatatccaa
tttgttatgtatcaaggcgaagtgtacgtgctggaagtaaatccgcgttcaagccgcacg
gtgccgtttttaagcaaaattaccaatgtgccgatggcgaatatcgcgacgaaagtcatt
ttaggagcgaaactcgcggaacttggctatgaaacaggcttgaggcaagaaagcgaagga
gtatacgtgaaagcgccggtcttctcatttgccaaactgcgcaacgtcgatatttcgctc
ggtccggaaatgaaatcaaccggcgaagtgatcggcaaagacgtgacatttgaaaaagcg
ttatataaagggttagttgcttcgggaatccatattcgtccatacggagctgtcctattg
acggttgccgataaagataaagaagatgcgattgaacttgcaagacgtttctatcaaatt
ggctatcagctgctcgcgacaaacggcacggcggaagcgttaaaagcggcggacattccg
gtaaccgtcgtcaataaaatccattccgcatcgccgaacattttagatgtgattcgtcaa
gggaaagcgcaagttgtcatcaacacgcttacaaaaggaaaacagccggaaagcgatgga
ttccgcattcgccgtgaagcggtcgaaaacggcattccatgcttaacctcgctggatacg
gcgaaggcgatgcttcaagtcatcgaatcgatgacgttttcgacaacggcgatgacacaa
gggatggtgcgcgtatga
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