Parageobacillus toebii NBRC 107807: DER53_10320
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Entry
DER53_10320 CDS
T06505
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
ptb
Parageobacillus toebii NBRC 107807
Pathway
ptb03030
DNA replication
ptb03430
Mismatch repair
ptb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DER53_10320
03430 Mismatch repair
DER53_10320
03440 Homologous recombination
DER53_10320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptb03032
]
DER53_10320
03400 DNA repair and recombination proteins [BR:
ptb03400
]
DER53_10320
Enzymes [BR:
ptb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DER53_10320
DNA replication proteins [BR:
ptb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DER53_10320
DNA repair and recombination proteins [BR:
ptb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DER53_10320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
HHH_3
DEDDh_C
RNase_H_2
DUF1409
Zn-ribbon_8
Motif
Other DBs
NCBI-ProteinID:
QIQ33144
UniProt:
A0A6G9J4W6
LinkDB
All DBs
Position
1986474..1990781
Genome browser
AA seq
1435 aa
AA seq
DB search
MLTNEQKERFQVLLQQLELTSDEFVPYFSEAGIQKLVIEKEKKCWHFYFLLPKILPYQVY
QLFTQKLVHAFHHIANVKYTIQTIDSHFTESDVRDYWTLCLQELQEGVSPLLSLLHEQVP
TVKGNKLYVTARNDAEAMAVKRRFAKKIAEVYQSFGFPLLQLEIEVKQSEKDFEQFIAQK
QQEDAERALAALTEMTKETKSETAGNAPAGPLIIGYPIREEEEIRTLDSIVEEERRVVVQ
GYVFDAEINELKSGRTLLTLKITDYTNSILVKMFSRDKEDAALMADVKKGMWVKVRGSVQ
NDTFVRDLVLIANDINEIKAKERQDTAPEGEKRVELHLHTPMSQMDAVTSVTKLIEQAKK
WGHPAIAVTDHAVVQSFPEAYSAAKKYDMKVLYGVEANIVDDGVPIAYNEAHRLLSEDTY
VVFDVETTGLSAVYNTIIELAAVKVKDGEIIDRFTSFANPHHPLSITTIELTGITDDMLK
DAPDVEEVLRQFYDWMGDSILVAHNASFDIGFLNVGFTKLGLGKVTNPVIDTLELARFLY
PELKNHRLNTLCKKFDIELTQHHRAIYDAEATGYLLMRLLKDAQERGILYHDELNERSKE
EVSYQRSRPFHVTLLAQNDIGLKNLFKLVSLSHVKYFYRVPRIPRSVLQQHREGILVGSG
CDKGEVFDNMIQKAPEEVEEIAKFYDFLEVHPPEVYKPLIEMDYVKDENMIKEIIRKIVM
LGEKLNIPVVATGNVHYLNPEDKIYRKILIHSQGGANPLNRYELPDVYFRTTDEMLKCFS
FLGEEKAKEIVVMNTQKIADLIGEVKPIKDKLYTPRIEGAEEEIREMSYRRAKEIYGDPL
PEIVEQRLEKELKSIIGHGFAVIYLISHKLVKKSLDDGYLVGSRGSVGSSFVATMTEITE
VNPLPPHYVCPNCKHSEFFNDGSVGSGFDLPDKNCPKCGTKYKKDGHDIPFETFLGFKGD
KVPDIDLNFSGEYQPRAHNYTKVLFGEDNVYRAGTIGTVADKTAYGFVKGYASDLNLQLR
SAEIDRLAAGCTGVKRTTGQHPGGIIVVPDYMDIYDFTPIQYPADDTSSEWRTTHFDFHS
IHDNLLKLDILGHDDPTVIRMLQDLSGIDPKTIPTDDPEVMKIFSSTESLGVTPEQIMCN
VGTLGIPEFGTRFVRQMLEETKPKTFSELVQISGLSHGTDVWLGNAQELIQNGTCTLSEV
IGCRDDIMVYLIYRGLEPSLAFKIMESVRKGKGLTPEFEEEMRKHDVPEWYIESCKKIKY
MFPKAHAAAYVLMAVRIAYFKVHHPLLYYASYFTVRAEDFDLDAMIKGSAAIRKRIEEIN
AKGLNATAKEKSLLTVLEVALEMCERGFSFKNIDLYRSQATEFVIDGNSLIPPFNAIPGL
GTNVALNIVRAREEGEFLSKEDLQQRGKLSKTLIEYLESRGCLDSLPDHNQLSLF
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atgttaacgaacgagcaaaaagagcgatttcaagtgttgttgcagcagcttgaattgacg
tctgacgaatttgttccgtatttctctgaggcaggcattcaaaagcttgtcattgaaaag
gagaaaaaatgttggcatttctattttttgctgccgaaaattttgccttatcaggtttat
caactgtttacacaaaagcttgttcatgcgttccatcatatcgcaaatgtgaaatataca
atacaaacgatcgattcccattttacggaatcggatgtgcgtgactattggacgctctgt
ttgcaagagttgcaagaaggggtctcgccgcttttatcgttgcttcatgagcaagttccg
actgtaaaaggaaataaactatatgttactgctcgcaatgatgcagaagcaatggcggtg
aagcgccgcttcgccaaaaaaatagctgaagtatatcaatcgtttggttttccgcttttg
cagctggaaatagaagtcaaacagtcagaaaaagattttgagcaatttatagcgcaaaaa
cagcaagaagatgcggaacgtgccttagcggcattaacggagatgacgaaagaaacgaaa
tcggaaacagcgggcaatgcgccggcagggccgcttattatcggttatccaattagagaa
gaagaggaaattcgcacgctagacagcatcgttgaagaagaacgccgcgtcgttgtacaa
ggatatgtgtttgacgcggagatcaatgagttaaaaagcggacggacgttattaacacta
aaaatcaccgattatacaaactcgattttagtaaaaatgttttcacgcgataaagaagat
gccgcactgatggcggatgtaaaaaaaggaatgtgggtaaaggtaagagggagtgtgcaa
aatgatacgttcgtccgtgaccttgtgttaatcgccaacgatataaacgaaataaaggcg
aaagaacgccaagataccgctccggaaggagaaaaacgggtggaacttcatttgcacacg
ccgatgagccaaatggatgcggtcacttccgttacgaagctcattgaacaagcaaaaaaa
tggggccacccagcgatcgctgttacggaccatgctgttgtgcagtcatttccagaagcg
tacagtgccgcaaaaaaatacgatatgaaagtattgtacggcgtcgaagcaaacattgtc
gatgacggcgtgccgatcgcctataacgaagcgcaccgcttgctttccgaggacacgtac
gtcgtctttgacgtggaaacgaccggtctatcggcggtgtataatacgattattgaactt
gccgctgtgaaagtgaaggacggagaaattatcgaccgctttacttcatttgccaacccg
catcatccgttatcgattacaacgatcgagctgacaggcattaccgatgacatgttgaaa
gatgccccagatgtcgaagaagtgctgcgccagttttacgactggatgggcgatagcatc
cttgtcgcacataatgctagctttgacattggatttttaaatgtcggctttacgaaactc
ggtcttggtaaagtgacgaatccggttattgatacacttgaattagcgcggtttttatat
ccagaattgaaaaatcaccgtttaaacacgctatgtaaaaaatttgatatcgagctaacc
cagcatcaccgagcgatttacgatgcagaagcgactggatatttgcttatgcgcctatta
aaagacgcgcaagaacgaggaattttatatcatgacgaattaaatgaacgttcgaaggaa
gaagtgtcgtatcaacgatcccgtccgttccatgtgacattgcttgcgcaaaatgacatt
ggattaaaaaatttattcaaactcgtttctttatcacatgtgaaatatttttaccgggtc
ccgcgcattcctcgctcagtgcttcagcagcatcgtgaaggaattttagtcggttccggc
tgtgataaaggggaagtatttgacaatatgattcaaaaagcgccggaagaagtcgaagaa
atcgcgaaattttacgattttctcgaggtgcatccgccggaagtgtacaaaccgctgatt
gaaatggattacgtaaaagatgaaaatatgatcaaggaaattatccgcaagatcgtgatg
ctcggggaaaaattaaacattcctgtcgttgcaactggaaacgttcattatttaaatcca
gaagataaaatttaccgaaaaattttgattcactcccaaggcggagcaaatccgctcaac
cgttatgagctgccggatgtatattttcggacgacggacgaaatgctcaagtgcttctcc
tttttaggagaagaaaaagcaaaagaaatcgtcgttatgaatacgcaaaaaatcgctgat
cttattggcgaggtaaagccgattaaagataagctgtatacgccgcgcattgaaggggcg
gaagaggaaattcgcgaaatgagttatcggcgcgccaaagaaatttacggtgatccgctg
ccggaaattgttgagcagcgcttggagaaagagttaaaaagcattatcggacacggcttt
gccgtcatttatttaatttcccataaactcgtaaaaaaatcgcttgatgacggctacctt
gtcggttcgcgcggatctgtcggctcctcttttgtcgcgacgatgacagaaattacagaa
gtaaatccgctgccgccgcactatgtttgtccgaattgcaagcactcggaatttttcaat
gacggttcggtcggttcaggatttgacttgccggataaaaattgtccaaaatgcggcaca
aaatataaaaaagatgggcatgatattccgtttgaaacgttccttggctttaaaggggat
aaagttccggatatcgacttgaacttctccggggaatatcagccgcgcgcccataactat
acgaaagtattgttcggagaagataacgtatatcgcgcaggaacgatcggtacggtggcc
gataaaacggcttacggttttgtcaaagggtatgcgagcgatttgaatttgcagctgcgc
agtgcggaaatcgaccgtcttgccgcgggatgtaccggggtaaaacggacaaccgggcag
catccaggaggcattatcgtcgttccggattatatggatatttacgattttacgccaatt
caatatccagctgacgatacgagttccgaatggcgcacgacgcattttgatttccattcg
attcatgacaatcttctgaagctagatattcttgggcacgacgatccgacggtaattcgt
atgctccaagatttaagcggcattgatccaaaaacgattccgacggacgatccggaagtg
atgaaaattttcagcagtactgaatcactcggcgtcacgccggaacaaattatgtgcaat
gtcggcacgctcggtattccagaattcggaacgcgctttgtccggcagatgcttgaagaa
acgaagccaaagacattttccgagctggtgcaaatttccggcctttcccatggaacggac
gtctggcttggaaacgctcaagagttaattcaaaacggcacttgcaccctttctgaagta
attggctgccgcgacgacattatggtttatttaatttatcgcgggcttgagccgtcgctt
gcctttaaaattatggaatcggtgcggaaaggaaaagggctaacgccggaattcgaagaa
gaaatgcgcaaacatgatgtgccggaatggtatattgaatcatgtaaaaagattaaatat
atgttcccgaaagcgcacgccgctgcgtacgtattaatggcggttcgcattgcttacttt
aaagtgcatcatccgcttttgtactatgcttcttattttacagtgcgtgcggaagacttt
gatttggacgcgatgattaaaggttctgcggcgattcgcaaacgcatcgaagaaattaat
gcgaaaggattgaacgcaacggcaaaagaaaaaagcttgttgacggtattagaggtcgct
ttagaaatgtgtgaacgcggattctcgtttaaaaacatcgacctttaccgttcacaggcg
accgaattcgtcattgacggcaattcgcttattccgccatttaacgccattccgggtctt
gggacaaacgtggcgctcaacatcgtccgtgctcgcgaagaaggagaatttttatcaaaa
gaagatttacagcagcgcggaaaactttcaaagacgctcatcgaatatttagagagccgc
ggttgtcttgattcgttgccagaccataaccagctttccttattttaa
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