KEGG   Parageobacillus toebii NBRC 107807: DER53_10360
Entry
DER53_10360       CDS       T06505                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
ptb  Parageobacillus toebii NBRC 107807
Brite
KEGG Orthology (KO) [BR:ptb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ptb03016]
    DER53_10360 (truB)
Enzymes [BR:ptb01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     DER53_10360 (truB)
Transfer RNA biogenesis [BR:ptb03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    DER53_10360 (truB)
 Prokaryotic type
    DER53_10360 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2
Other DBs
NCBI-ProteinID: QIQ33152
LinkDB
Position
1996318..1997226
AA seq 302 aa
MDGVLLLYKPPGMTSHDCVARIRRMLQIKKVGHTGTLDPNVSGVLPICIGKATRIAEFLT
GATKTYEGEVTLGIATTTEDSTGEIIAKQKVDRVIPRDEIEAVFRQLTGEVAQTPPMYSA
VKVKGKKLYEYARAGIEVERPTRIVTIHELTLLDERDAFAGDIVSFRFRVTCSKGTYIRT
LAVMIGERLGYPAHMSDLVRTASGPFSLQDCVTFEQLEQYIESGQLKSILLPIGKALFHL
PKYEINDKVAEKVKNGAILPLPAFLQSLEGPVLMISKQREALALYIKHPTKPHLMKPLKV
LR
NT seq 909 nt   +upstreamnt  +downstreamnt
atggacggagtattattattgtataaaccgcctggaatgacatcacatgactgtgttgca
cgcattcgccgcatgctgcaaataaaaaaggtagggcatacagggacgcttgatccaaac
gtatcaggagtattgccgatttgcattggcaaagcgacgcgcatcgctgagtttttaaca
ggggctacgaaaacatatgagggggaggttacattagggattgctacgacaacggaagac
agcacaggtgaaatcatcgcaaaacaaaaggtagaccgtgttattccacgcgatgaaatc
gaagcggtgttccgtcaattgacgggagaagttgcgcaaacgccgccaatgtattccgcg
gtaaaagtgaaaggaaagaaactatacgaatatgcgcgtgcgggcattgaagtcgagcgg
ccgactcgcattgtgacgatccatgaactaacattgcttgatgaaagagacgcgtttgca
ggagacatcgtttcgtttcgctttcgtgtcacttgcagcaaaggtacatatattcgtaca
ttagcagtgatgatcggcgaacgtcttggctacccagcccatatgtccgaccttgttcgt
actgcatccggtccattttccttgcaagattgcgtcacatttgaacaattagagcagtac
atagagagcggccaactgaagtcgattttactgccgattggcaaagcactttttcatttg
ccgaaatatgaaataaatgataaagtagcagagaaagtaaaaaacggagcaatattgccg
cttccagcttttttacagtcgctcgagggaccggtattaatgataagcaagcaaagagag
gcacttgccctttatataaaacatcctactaaacctcacttaatgaaaccattaaaagta
cttcgatga

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