Parageobacillus toebii NBRC 107807: DER53_10375
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Entry
DER53_10375 CDS
T06505
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ptb
Parageobacillus toebii NBRC 107807
Pathway
ptb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DER53_10375 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptb03019
]
DER53_10375 (pnp)
03016 Transfer RNA biogenesis [BR:
ptb03016
]
DER53_10375 (pnp)
Enzymes [BR:
ptb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
DER53_10375 (pnp)
Messenger RNA biogenesis [BR:
ptb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DER53_10375 (pnp)
Transfer RNA biogenesis [BR:
ptb03016
]
Prokaryotic type
tRNA degradation factors
DER53_10375 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
ATP-grasp
KorB
SPATA25
OB_RRP5_4th
S1_2
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
QIQ33155
LinkDB
All DBs
Position
1998769..2000907
Genome browser
AA seq
712 aa
AA seq
DB search
MEQEKRIFSIDWAGRPLVVEIGQLAKQANGAVLVRYGDTVVLNTATASKEAKNVDFFPLT
VNYEERLYAVGKIPGGFIKREGRPSEKAILASRLIDRPIRPLFAEGFRNEVQIVSMVMSV
DQDCSPEMAALFGASLALTISDIPFEGPIAGVTVGRVDGEFVINPTVEQLEKSDIHLVVA
GTKDAINMVEAGADEVPEEVILEAIMFGHEEVKRLIAFQEEIAAQVGKEKMEVVLYELDP
QLEAEIRQLAEEDIKRAVQVPEKLARDAAIEEVKASVIAKYEEQEADEETLKQVNEILHK
LVKEEVRRLITEEKIRPDGRKIDEIRPLSSEVGVLPRTHGSGLFTRGQTQVLSVCTLGAL
GDVQILDGLGIEETKRFMHHYNFPPFSVGETGPMRGPGRREIGHGALGERALEPVVPSEK
EFPYTIRLVSEVLESNGSTSQASICASTLAMMDAGVPIKAPVAGIAMGLVKNDDNYTILT
DIQGIEDHLGDMDFKVAGTAKGVTALQMDIKIKGLSREILEEALQQAKKGRMEILEHMMQ
TIREPRKELSKYAPKILTMQINPEKIREVIGPSGKQINKIIDETGVKIDIEQDGTIFISS
VNEAMNQKAKQIIEDIVREVEVGQIYLGKVKRIEKFGAFVELFNGKDGLVHISELAEERV
GRVEDVVSIGDEILVKVMEIDKQGRVNLSRKAVLREKKEKKGKRPERHRMKP
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggagcaagaaaaacgcattttttccatagactgggctggacggccgcttgtcgtggaa
attggccaattagcgaaacaagcgaatggagcggtattagtccgttatggcgacacagtg
gtattaaacacagcaacggcatcaaaagaagcaaaaaacgtcgacttttttccactaacg
gtcaactatgaggagcgtctttatgcggttggtaaaattccgggaggatttattaagcgg
gaaggacgtcctagtgaaaaagcgattttagcaagccgtttaattgaccggccaattcgt
ccattgtttgcggaaggattccgcaatgaagtgcaaatcgtttcgatggtcatgagtgta
gaccaagattgttctccggaaatggcggcgttattcggtgcgtcacttgccttaacgatt
tcggatattccgtttgagggaccgattgccggtgttacagtcggccgtgtggatggagag
tttgtgattaatccgactgtcgaacaattggaaaaaagcgatattcatcttgttgttgcc
ggcacgaaagacgcgattaatatggtcgaagctggagcggacgaagtgccggaagaagtg
attttagaagcgattatgttcggacatgaagaagtaaaacggctgatcgctttccaagag
gaaatcgccgcccaagtaggcaaagaaaaaatggaagtagttctttatgagcttgatcct
caactagaagcagaaattcgccaactggcggaagaggatattaaacgagctgttcaagtg
ccagaaaaattggcgcgtgatgcagcaattgaggaagtaaaagctagtgtcatcgcaaaa
tacgaagaacaagaagcagatgaagaaacattaaaacaagtaaatgaaattttgcataaa
cttgttaaagaagaagtgcggcggcttattaccgaagaaaaaatacgtccggacggccgt
aagattgacgaaattcggcctctctcctctgaagtcggcgtattgccgcgcacgcacggt
tcagggctgtttacgcgcggacagacgcaagtgcttagtgtttgtacgttaggagcgctt
ggcgatgtacaaatattggacgggcttggtattgaagaaacgaaacggtttatgcaccac
tataacttcccgccattttcggttggcgaaacaggaccgatgcgcgggccaggccgccgt
gaaattggacacggagcgcttggagaacgagcgttagaaccggtcgttccatctgaaaaa
gaatttccatataccattcgccttgtttccgaagtgctagaatcgaacggttcgacatct
caagctagcatttgtgcaagcacgctcgcgatgatggatgcaggtgtcccgattaaagca
ccggtagcgggaatcgcgatgggacttgtgaaaaacgatgacaattatacgattttgaca
gatattcaaggcattgaagaccatctcggagatatggattttaaagtagcgggtacggca
aaaggcgtcaccgctttgcagatggatattaaaattaaaggcttatctcgtgaaatatta
gaagaagcgctccagcaagcgaaaaaaggtcgtatggaaattttagaacatatgatgcaa
acgatccgcgagccgcgcaaagagttgtcgaaatacgctccgaaaattttaacgatgcaa
attaatccagaaaaaattcgcgaagtcatcggcccaagcggaaaacaaattaataaaatt
attgatgaaaccggcgtaaaaattgatatcgaacaagatggaacaattttcatctcgtct
gtcaacgaagcgatgaaccaaaaggcgaagcagattatcgaagatatcgttcgcgaagtc
gaagtcgggcaaatttatttgggtaaagtgaagcgcattgagaaatttggggcatttgtt
gaattgttcaacggcaaagacggtctcgttcatatttccgaattagcagaagagcgtgtc
ggaagagtggaagatgtcgtttcgatcggcgatgaaattttagtaaaagtaatggaaatt
gataaacaaggacgcgttaatttatcgcgaaaagcagtattgcgcgagaaaaaggaaaaa
aaaggcaaacgtccggaacggcatagaatgaagccttag
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