Parageobacillus toebii NBRC 107807: DER53_11660
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Entry
DER53_11660 CDS
T06505
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
ptb
Parageobacillus toebii NBRC 107807
Brite
KEGG Orthology (KO) [BR:
ptb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptb03000
]
DER53_11660
Transcription factors [BR:
ptb03000
]
Prokaryotic type
Helix-turn-helix
Other families
DER53_11660
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
GAF
AAA_5
PAS_9
Mg_chelatase
AAA_2
PAS_4
AAA
MCM
PAS
HTH_23
PAS_8
HTH_50
HTH_30
HTH_29
HTH_28
PAS_7
HTH_1
Diacid_rec
HTH_7
nSTAND3
Diguanyl_cycl_sensor
3H
AAA_3
HTH_AraC
Mga
IclR_C
Beta-prop_WDR19_2nd
AAA_7
RWP-RK
HTH_psq
Xre-like-HTH
HTH_17
HTH_22
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QIQ33345
LinkDB
All DBs
Position
2270079..2272004
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AA seq
641 aa
AA seq
DB search
MNSRREDVKEMWKRFIFENELDEKLSPIVKDSWIRSKKWKVDPFQPYGHIKKIEIERYRN
LIDWSMPLMEGLYSIVKGSGFLVILCNEEGQLLKSIGDPDTLEMAAKIGFVEGADWSEQT
MGTNAIGTSIVIDQPVQIFAEEHYSQICQSWTCSAAPIHDSKGNIIGVLNVSGPYEKVHP
HTLGMVVSAVKAIEYQLKLNENTEKNIMMQRFLEATTNNMKEGILIIDTEGKIIKANDQL
KKLLCLDQSHLEGKKINEIFTNKSIVSNKPVYLQNKELHLKVKPSGNIHHVMVDKIPIYK
DKRWIGSMIMLKEIEKVRQFVNCLSGNQAKITFDDIIGQHPHFIQKLNEAQLAAATDSNV
LILGESGTGKEMFAQAIHNASKRKNKPFIAINCGGIPRDLLGSELFGYVEGAFTGAKKGG
SAGKFELADGGTLFLDEIGEMSLEMQVLLLRVIQEKEVMRIGGHKVIPVDVRIIAATNKN
LREEVQKGSFREDLFFRLNVMPITLPPLRKRKEDIPLLVHHFVGKLCKKLNKPFPEIRPD
FLEALIQYDWPGNIRELQNILERTLNRNTKPILSAKDLPEEVFQMFPGQKREEMSLHRDE
IKKQSIIQALRLCNGNITKAAKHLGISRSTFYRQMKKFNIS
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
gtgaatagtcggcgggaggatgtcaaagaaatgtggaagcgctttatttttgaaaatgaa
ctagatgaaaagctttcccccattgtcaaagactcatggattcgatcaaaaaaatggaag
gtagatccttttcagccatatggccatataaaaaaaatcgaaatagaacggtatagaaat
cttattgattggtccatgccattaatggaaggactctattccatcgtaaagggatccgga
tttttagtcatcctttgcaacgaagaaggacagctattaaaatcaattggtgatcccgat
acactagaaatggctgctaaaatcggctttgtcgagggagctgattggagcgaacaaacc
atgggcaccaatgcaattggaacatccattgttatcgatcagcctgtacaaatatttgct
gaggaacattattcgcaaatatgtcaatcatggacttgttccgcagccccgattcatgat
tccaaaggcaacattatcggagtattaaatgtctccggcccatatgaaaaggtgcatcct
catacgttgggcatggtggtttcagcagtcaaagccattgagtatcaattgaaattaaat
gaaaatacggaaaaaaatatcatgatgcaaaggtttcttgaagcgacaaccaataatatg
aaagagggtatcttaattattgatacagaaggaaaaattataaaagccaatgatcagctg
aagaaacttctttgcctcgatcaatcgcatctagaagggaaaaagatcaacgaaattttt
acaaataaatctattgtttcgaataagcctgtctatctgcaaaacaaggaactccattta
aaagtgaagccatcaggaaatatccatcatgtaatggtcgataaaatccccatttataaa
gacaaacgctggattggttcgatgatcatgctgaaagaaatcgaaaaagtgcgccaattt
gtcaattgtttatccggaaatcaggcaaaaataacgtttgatgatattatcggacagcat
ccgcatttcattcaaaaactaaatgaagcccaacttgccgcagcaaccgattccaacgtt
ttaatattaggggaaagcggaacgggaaaagaaatgttcgcacaagccatccataacgcg
agcaagagaaaaaacaaaccgtttattgccatcaattgcggcggaattcctcgcgatctt
cttggcagtgaactgtttggttatgtggaaggggcttttacgggagccaaaaaaggagga
agcgcaggaaaatttgaacttgctgatggcggaacgctctttttagatgaaattggtgaa
atgtctctggaaatgcaggtccttcttttacgagtcatccaggaaaaagaagtgatgcgg
atcggcggccataaagtgataccagtggatgtccgaattattgcagccacaaataaaaat
ctccgcgaggaagtccaaaagggaagtttcagggaagatttgttctttcgtctcaatgtc
atgccgatcactctgcctcctttgcggaaaagaaaagaagatataccccttcttgtccat
cattttgtcggtaaactttgcaaaaaattaaacaagccgtttccagaaatcagaccagac
tttttagaagctctcattcagtacgactggccagggaatattcgggaattgcaaaatata
ctagaaagaacgttaaaccgaaatacaaaaccaattttatctgcaaaagatttaccggaa
gaagtgtttcaaatgtttccagggcaaaaaagggaggagatgtcgttacatagggatgag
atcaaaaaacaatctattatccaggcattacgtttatgtaacgggaatatcacgaaagca
gccaaacatttagggatttccagaagcactttttatcggcaaatgaaaaaatttaatatt
tcctaa
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