Parageobacillus toebii NBRC 107807: DER53_14540
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Entry
DER53_14540 CDS
T06505
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ptb
Parageobacillus toebii NBRC 107807
Pathway
ptb03030
DNA replication
ptb03430
Mismatch repair
ptb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DER53_14540
03430 Mismatch repair
DER53_14540
03440 Homologous recombination
DER53_14540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptb03032
]
DER53_14540
03400 DNA repair and recombination proteins [BR:
ptb03400
]
DER53_14540
Enzymes [BR:
ptb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DER53_14540
DNA replication proteins [BR:
ptb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DER53_14540
DNA repair and recombination proteins [BR:
ptb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DER53_14540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DEDDh_C
Laminin_I
Motif
Other DBs
NCBI-ProteinID:
QIQ33810
LinkDB
All DBs
Position
complement(2849546..2850277)
Genome browser
AA seq
243 aa
AA seq
DB search
MSERHRFWQRALRFLSLEIPREASSAFIGGEHSLQQEMWLRSLRKEQQKQIDMTMPLDEV
MFIIIDMETTGFSPQHGDEILAMAAAKTVNGIVKETYFTLVCPEKAIPPHISSLTGIQAE
DVQHAPRLWEAMRSFLSFIHGGVMIGYHIGHDLSFLNHFLWTYYRTKWTARFLDMQPIAE
MVRHRPFPSLDAALQYYGISCEKRHTADGDVQAMAELWDRLLEELKSRNIETLNDLYSAL
SMR
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgagcggcatcgtttttggcagcgggcgcttcgttttttgtcacttgaaataccg
cgcgaagcatcgtccgcgttcataggcggagagcattcgttgcagcaagaaatgtggctt
cgttctttaaggaaagagcaacagaagcaaatcgatatgacgatgccccttgatgaagtc
atgtttataatcattgacatggaaacgacggggttttcgccgcaacacggtgacgaaatt
ttagcgatggcggcggcgaaaacggtaaacggaatcgtaaaagaaacatattttacgctc
gtttgtccagaaaaagcgattccgccgcacatttcttcgctgacaggaattcaagcagaa
gatgtgcaacatgcgccgcgcctatgggaggcgatgcgttcgtttttatcgttcatccat
ggaggggtaatgatcggatatcatattggccatgatttatcgtttcttaatcattttctc
tggacgtattaccggacaaaatggactgcgcgttttttagatatgcagcccattgccgaa
atggtgcggcatcgtccgtttccttcgctagatgcggcattacaatactacgggatttcc
tgcgaaaaacggcatacggccgatggggatgtacaggcgatggcagagctatgggatcgg
ctattagaagaattaaaaagcagaaacatagaaacgttaaatgatttgtatagcgcgcta
agcatgcgataa
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