Parageobacillus toebii NBRC 107807: DER53_16035
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Entry
DER53_16035 CDS
T06505
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ptb
Parageobacillus toebii NBRC 107807
Pathway
ptb00300
Lysine biosynthesis
ptb00470
D-Amino acid metabolism
ptb01100
Metabolic pathways
ptb01110
Biosynthesis of secondary metabolites
ptb01120
Microbial metabolism in diverse environments
ptb01230
Biosynthesis of amino acids
Module
ptb_M00525
Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine
ptb_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ptb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DER53_16035 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DER53_16035 (lysA)
Enzymes [BR:
ptb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
DER53_16035 (lysA)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QIQ34063
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All DBs
Position
complement(3123484..3124803)
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AA seq
439 aa
AA seq
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MFFHGTSRVNDKGHLEIGGVDTVDLAKEYGTPLYIYDVALIRERARGFKEAFQKHGVKAQ
VAYASKAFSSIAMVQLAEEEGLSLDVVSGGELYTALQAGFPPERIHFHGNNKSRDELMMA
LDHGVGCIVVDNFYELELLEQLSKQYGKKTAILLRVTPGVEAHTHDYILTGQEDSKFGFD
LNNGQADEALQKALSSPHFSVMGIHCHIGSQIFETTGFVLAAQKIFQKIGQWKETYGFIP
TVVNLGGGFGIRYTSDDDPIPVSEYVDQIVEEVKKQASEKNIPMPEIWIEPGRSLVGDAG
TTIYSIGSRKEVPNVRHYVAVDGGMSDNIRPALYDAKYEAVLANRVLDEKNEIVAIAGKC
CESGDMLIWDLPLPKASPGDYLAVFCTGAYGYSMANNYNRIPRPAVVFVENGEAQLVVKR
ETYEDLVRLDVPLKTKVNK
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgttttttcatgggacaagccgtgtcaatgacaaggggcatttagaaattggcggtgtc
gataccgttgatttagcgaaagaatatggaacaccattgtatatttatgatgtggcactc
attcgtgagcgtgcgcgggggtttaaagaagcgtttcaaaaacatggcgtcaaagcacaa
gttgcctatgcaagcaaggcattttcttccattgcgatggttcagttagcagaagaagaa
ggattatcgttggatgtagtgtcaggaggagagctgtatacagcattgcaagcgggattt
ccgccagaacgcatccattttcatggaaataataaaagtcgcgacgaattaatgatggcc
cttgatcatggagtcggatgcattgttgtcgataacttttatgaactggaattgttggaa
caactaagcaagcagtacggaaaaaaaacggcgattttactaagagtcacccctggtgtg
gaggcgcatacgcacgattatattttaaccggtcaggaagattcaaaatttgggtttgat
ttgaacaatggccaagcagatgaagcgctgcaaaaagcgctatcttccccgcatttttcc
gtaatgggaattcactgccatatcggttcgcaaattttcgaaacgacaggatttgtgttg
gcggcacaaaaaattttccaaaaaattggtcagtggaaggaaacgtacggatttattcca
acggttgtcaatcttggcggtggatttggcattcgctatacgagtgatgacgacccgatt
cctgtctcggaatacgtcgaccaaattgtagaggaagtaaagaaacaagcaagcgaaaaa
aatattccaatgccagaaatctggattgagccgggacgctcccttgtcggcgatgcggga
acgacgatttattcgatcggttcgcgcaaagaagtgccgaatgtccgtcattacgttgcg
gtagacggagggatgagcgacaatatccgcccggcgctatatgatgcgaagtatgaagcg
gtgttagcgaatcgagtgttggacgaaaaaaatgaaattgtcgccatcgccgggaagtgt
tgtgaatcaggagatatgcttatttgggatttgccgctgccaaaagcatcccctggcgat
tatttagccgttttttgcactggggcgtatggctattcgatggcgaacaactataaccgc
attccacgtccagctgtcgtgtttgtggaaaatggagaagcacaactcgttgttaaacgg
gaaacgtatgaagatttagtgcggcttgatgtaccgcttaaaacaaaagtgaataagtaa
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