Candidatus Phycorickettsia trachydisci: phytr_1100
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Entry
phytr_1100 CDS
T05372
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ptc
Candidatus Phycorickettsia trachydisci
Pathway
ptc03030
DNA replication
ptc03430
Mismatch repair
ptc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
phytr_1100
03430 Mismatch repair
phytr_1100
03440 Homologous recombination
phytr_1100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptc03032
]
phytr_1100
03400 DNA repair and recombination proteins [BR:
ptc03400
]
phytr_1100
Enzymes [BR:
ptc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
phytr_1100
DNA replication proteins [BR:
ptc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
phytr_1100
DNA repair and recombination proteins [BR:
ptc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
phytr_1100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DEDDh_C
DNA_pol_A_exo1
Glyco_hydro_59M
Motif
Other DBs
NCBI-ProteinID:
AVP87071
UniProt:
A0A2P1P726
LinkDB
All DBs
Position
137750..138442
Genome browser
AA seq
230 aa
AA seq
DB search
MVLEEIVLDTETTGLDPKSGHKIVEIGAIKLKNKIPTGDKFHYYINPLRSMPIEAYNVHG
ISESFLSDKPTFDIVADEFLDFVKGSTLVIHNAAFDVKFLNHELITIGKGPLCSSIKVVD
TLQLARSLYPGKKVSLDALCERFKLDLSNRKLHGALKDAELLAGVYYFMSISSLQQQCTF
EMQADFKEIKKMNQKQTSLSAKVIKPTELELQEHLALVRKMQNALWNEYK
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggtattagaagagatagtattagatacagagacaaccggtcttgatccaaaaagcggt
cataagatagtagaaatcggagccataaagcttaaaaacaagattccgacaggtgataaa
tttcattattatataaatcctttgcgcagtatgccaatagaagcatacaacgtgcatggg
atatcagaaagttttctatctgacaagccaacatttgatattgtagctgatgaattctta
gacttcgtcaaagggtcgactctagtaattcataatgctgcatttgatgtgaagtttttg
aatcatgagctgattactattggtaaagggcctttatgctcttctattaaagttgttgat
actcttcaattagccagaagtctatatcctggaaaaaaagtttctctcgatgctttatgt
gaaaggtttaagcttgatttatctaacagaaagctccatggcgctctaaaagatgctgaa
ctgcttgctggagtctattacttcatgagtataagttctttgcagcagcaatgtactttc
gagatgcaagcagactttaaagaaatcaaaaaaatgaatcaaaaacagactagtctatca
gctaaagttattaaacctactgagcttgagttgcaagaacacctagcattagtgcgaaaa
atgcaaaatgctctttggaatgagtataagtag
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