Candidatus Phycorickettsia trachydisci: phytr_12520
Help
Entry
phytr_12520 CDS
T05372
Name
(GenBank) DNA polymerase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ptc
Candidatus Phycorickettsia trachydisci
Pathway
ptc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ptc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
phytr_12520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptc03400
]
phytr_12520
Enzymes [BR:
ptc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
phytr_12520
DNA repair and recombination proteins [BR:
ptc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
phytr_12520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
AFF4_CHD
Motif
Other DBs
NCBI-ProteinID:
AVP88176
UniProt:
A0A2P1PAA5
LinkDB
All DBs
Position
complement(1419088..1419804)
Genome browser
AA seq
238 aa
AA seq
DB search
MNQENLLKWYNLMEIDFLIPAQEKASNKIESLTDKVDYARSIADTASSLIELKNALENFE
LCELKFGAKNLVFADGQANARIMLIGEAPGATEDEQGIPFCGMSGKLLDTALSSIGLSRS
KNFYITNTVFWRPPNNRQPLAEEVEICRPFLEKHIALINPQIIVMVGGVALTTLFGKNAQ
TSSFRRKLHMYSNSYIQNVPTTAIFHPAYLLRQPFKKKDTWFDLLHLQNILRTKSILN
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaagaaaatttacttaaatggtacaatttaatggaaatagattttttaattcct
gctcaggaaaaagcttcgaataagatagagtccttaactgataaagtagattatgcaaga
agtattgctgatacggcttctagcctcatagagcttaagaatgcattagaaaattttgag
ttgtgtgaattaaaatttggcgcaaaaaacttagtatttgctgacggtcaggcgaacgca
agaattatgctaatcggagaggcaccaggtgcaactgaggatgagcagggaatacctttt
tgcggtatgagcggaaagttactagataccgcgctaagtagcatagggctatctcgaagc
aagaatttttatattacaaacactgtgttctggcggccaccaaataaccgtcagccttta
gcagaagaggtagaaatctgcagaccatttcttgaaaagcatattgcgctaatcaatcct
cagattattgttatggttggaggagttgcgctaactactttatttggtaaaaacgctcaa
acatccagctttaggcgcaagcttcatatgtactcaaattcttacattcaaaacgttcca
acaaccgcaatttttcaccctgcatatctcttgcgtcagccttttaaaaagaaggacacg
tggtttgatttgctacatcttcaaaatattttacgcacaaaaagcattttgaattaa
DBGET
integrated database retrieval system
