Candidatus Phycorickettsia trachydisci: phytr_2930
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Entry
phytr_2930 CDS
T05372
Name
(GenBank) Putative 23S rRNA (Uracil-5-)-methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
ptc
Candidatus Phycorickettsia trachydisci
Brite
KEGG Orthology (KO) [BR:
ptc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptc03009
]
phytr_2930
Enzymes [BR:
ptc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
phytr_2930
Ribosome biogenesis [BR:
ptc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
phytr_2930
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
MTS
PabTrmU54_TRAM_dom
Motif
Other DBs
NCBI-ProteinID:
AVP87249
UniProt:
A0A2P1P7K6
LinkDB
All DBs
Position
complement(336941..338194)
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AA seq
417 aa
AA seq
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MSIVQKGICQIEDLDERGRGIGIFEGHKISLPYTIHGETVEFDKHTYRRRSNYTLNKILK
ASPSRIQPLCKYFGQCGGCVLQHLNLQEYTKFKESLIKKSLADYQIQTNLLPIINVPPGN
RRRANFEAVKKEDKLFMGFHKLSSHKIVDLDSCPALLPDLSKLIPNLKSLLSNILDIRQK
AKIFVTQASNGIDVTFELYGQKVLSDTQKKQIETFAEKNNLIRSVFRARKFIDIVYQIEE
PYVIFGDLKVPVDAYCFLQASFESDKILQNLILKYSSGKKGVDLFCGRGTFLLPLSQHYS
MDGFESDKHAVEALSSIIENLDINVTKQDLFLSPLTSRQLSIYDFAVINPPRCGAEAQII
ELAKSYIKRIIYVSCNPSTFARDAKILIQNGFTLEQVQGVDQFYWSHHLEVAGVFSK
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
gtgagtatagtacaaaaaggaatttgtcaaattgaagatttagatgaacgtggcagaggc
ataggaatatttgaagggcacaaaatatctctgccttatacaattcatggcgagaccgta
gagtttgataaacacacatatagacgcagatcaaattatactcttaataaaattctgaaa
gcatcacctagtagaattcagccattatgtaaatattttggacaatgcggaggctgcgta
ctacagcacttaaatttacaagaatacacaaaatttaaagaatctttaatcaaaaaaagt
ttagcagattaccaaatacaaactaacctacttccaattatcaacgtaccaccagggaat
cgcagacgagctaactttgaggcagtaaagaaagaggataagttatttatgggctttcat
aagctttcatctcataagattgtagaccttgatagctgccccgccctgctgcctgattta
tcaaaattaataccaaatcttaaaagcctcctatctaatattttggacataagacaaaag
gctaaaatatttgttacgcaagcaagtaatgggatagatgtgacctttgagttatatgga
caaaaagttctaagcgatactcaaaagaagcaaattgaaacctttgctgaaaaaaataac
ctaattagatcagtatttagggctagaaaatttattgacatcgtatatcaaatagaagaa
ccatatgttatttttggagacttaaaagtccccgtagatgcttattgctttctgcaagca
agctttgaatctgataaaattttgcaaaatcttattttaaagtattcatcgggcaaaaaa
ggtgttgacctattttgcggcagagggactttcttattacccttaagtcagcactacagt
atggatggatttgagtcagacaaacatgctgtagaagcactctcatcaattatagaaaac
ttagacatcaatgtaaccaagcaggatctctttttatcccccctgactagcaggcagtta
agcatttatgattttgcagttattaaccccccgagatgtggagcggaagctcaaatcata
gagcttgctaaaagctatataaaacgcataatttacgtctcatgcaacccatccacattt
gctagagatgcaaaaattttaatccaaaatggtttcactttagaacaagtccaaggcgtt
gatcaattttattggagtcatcatttagaggtagctggggtcttttcaaaataa
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