Candidatus Phycorickettsia trachydisci: phytr_3080
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Entry
phytr_3080 CDS
T05372
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ptc
Candidatus Phycorickettsia trachydisci
Brite
KEGG Orthology (KO) [BR:
ptc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptc03400
]
phytr_3080
Enzymes [BR:
ptc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
phytr_3080
DNA repair and recombination proteins [BR:
ptc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
phytr_3080
Prokaryotic type
phytr_3080
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AVP87262
UniProt:
A0A2P1P7M2
LinkDB
All DBs
Position
350953..352482
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AA seq
509 aa
AA seq
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MHEQKNYNIVWFKKDLRIFDHAPFFESCITGQILPLYIVEPELYTLADSSPRHWHFIYDC
LIDLRGDLRALGGNLIIRVGEVLQVMENLFHQLGHFTLYSHEETGNAWTYERDKSIKAWC
NSRSIIWREFPTNGIVRRLASRDKWSSIRDKRMNNILVSVPENISFVQGINSDDLPSKDH
KIFGKDISNKIQKGGRSEGIKVLNSFLSERGKGYMRYISKPGLSQNHCSRLSAHITYGTL
SVREIEHATKAKINSLTCNPDPEASFFIRNLEAFLSRLAWHCHFIQKLEQQPEIEFKCTH
SAFEGMRESYFREDFFEAWKSGNTGYPLVDACMRALHQNGWITFRMRALLVSFASYDLWL
DWCKTAPFLAKLFTDYEPGIHYSQFQMQSGVTGINTFRIYNPIKQSYDQDKDGEFIRRYV
PELKSVPDCFIHEPWKMIESIKNYPAPIVNHEKAIQKARSEISKRINATGFQEEAKLIVQ
KLGSRNRKPVRSSKSAKVSKGQLSLNLLS
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgcatgagcaaaaaaactataatatagtatggtttaagaaagatttgcgtatttttgat
catgctcctttctttgagagctgtataacaggtcaaattttaccgctttatattgttgag
ccagagttatacaccttggcagattcatcgcctagacattggcattttatttatgattgt
ttaatcgatttgcgtggagatttaagagcgcttgggggtaatttaatcattcgtgttggg
gaagtattgcaagtgatggaaaacttatttcatcaacttggtcattttactttatattct
catgaagaaactggtaatgcttggacatacgaaagagataagtctataaaagcttggtgt
aattctcggagtattatttggagagagtttccaacaaatggcatagtaagacgtcttgca
agtagggataaatggtctagcattcgtgataaacgtatgaataacattttagtgtctgtt
cctgagaatataagttttgtacaaggaataaattctgatgatttaccatctaaagatcat
aaaatctttggtaaagatatatctaataaaatacaaaaaggtggacgaagtgaaggaata
aaggttttaaattctttcttaagtgaaaggggtaagggatatatgcgctacatctcaaaa
cctggcttatcacaaaatcactgttctcgtttaagtgctcatatcacctatggtaccttg
tctgtgagagaaatagagcatgctacaaaagctaaaataaactcgttaacttgcaatcct
gatccagaggcttcattttttatacgtaatcttgaggcatttttatcaagattagcttgg
cactgtcattttatacagaagttggagcaacagccagaaatagagtttaagtgcactcat
tctgcgtttgaaggtatgagagagtcttattttagagaagatttttttgaggcttggaaa
agtggtaatacaggttatcctttagttgatgcgtgtatgcgagcgttgcatcaaaacgga
tggattacgtttcgaatgagagcgttactagtgtcatttgcaagctacgatttatggcta
gattggtgtaagacggcaccatttcttgcaaagttatttacagattatgaacctggtatc
cattattctcaatttcaaatgcaatctggtgtaaccggtattaacacctttagaatctat
aacccaataaaacaatcttatgatcaagataaagatggtgaatttattagacgttatgta
cctgagttaaagagtgtgcctgactgttttatccatgagccttggaaaatgatcgagagt
attaaaaattatcctgcgccaatcgtcaatcatgaaaaagcaattcaaaaagcccgttca
gagattagtaaaaggatcaacgcaacaggttttcaagaagaagcaaaactgatagtacaa
aaacttggtagtaggaatagaaagcctgttaggtcaagtaaatctgctaaagttagcaaa
gggcagctttctctaaatttacttagttga
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