Candidatus Phycorickettsia trachydisci: phytr_4110
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Entry
phytr_4110 CDS
T05372
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ptc
Candidatus Phycorickettsia trachydisci
Brite
KEGG Orthology (KO) [BR:
ptc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptc03032
]
phytr_4110
03400 DNA repair and recombination proteins [BR:
ptc03400
]
phytr_4110
Enzymes [BR:
ptc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
phytr_4110
DNA replication proteins [BR:
ptc03032
]
Prokaryotic type
DNA Topoisomerases
phytr_4110
DNA repair and recombination proteins [BR:
ptc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
phytr_4110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
HU-CCDC81_bac_1
Motif
Other DBs
NCBI-ProteinID:
AVP87362
UniProt:
A0A2P1P7X4
LinkDB
All DBs
Position
complement(458414..461116)
Genome browser
AA seq
900 aa
AA seq
DB search
MSAVLQEITLDIPIEDEMKRSYLDYAMSVIVSRALPDVRDGLKPVHRRILYSMYESGYYY
NKQHRKSARIVGDVMGKYHPHGDMAIYDSLVRMAQNFAMRIPLIDGQGNFGSIDGDSAAA
MRYTESKLTKISHTLLNDIDKNTVDFQPNYDATESEPQVLPAAFPNLLVNGSGGIAVGMA
TNIPPHNLCEIIDACIAYIDNNEITIDELMEIIQGPDFPTAATIVGRSAIKSAYHTGKGI
IYIRGKASIEDLDKRQAIIIEEIPYAVNKAKMIEKIAELVNTQKIQGISNIRDESDRTGI
RVVVEIKKDFAASVILNQIYSYTPLQVSFGINMVALDQGIPKLMNLKQIIQSFVDFREEV
LRKRSIYLLNQARDKANILFALRIAISNIDEIIAIIKGSNDTAEARDKLLAKTWNIEDLG
NLTDLLGTLGDTREISPQYRFSEEQVRAILDMRLHKLTSLEHSKIEADFLKLMSEIKYLL
SLLESRELLLGVMKDDLREIREEFGTPRLTQIEDGEMSDQDIEDLMQKEDMVVICTLGGY
IKRVPLNSYRNQKRGGKGRNTLSGEDIATQVFVGTTHTPVLFFSTSGKVYSLKLYKIPLG
SPQSKGRALVNLFPDLKPGETINNILLLPENVAELENLNLIFATASGCVRRSSLDDFKRI
ASNGKIAIRLEEDDSLVEVSLCKSDMHILISTKMGQSIRFAVSDLRVFKSRTSDGVRAIK
LKPKDRVISMTILKGANYPLLERDSYLSIPYATRLKIKGDPEYNLKKIEETSSLTKEQIT
EMAQNEEVIFSITSKGFGKCSSAYEYRVTARGGSGVSNMNTSNKTGHLVTVVPITGHNDE
VILVTNTGKLIRFNIDSIRVTGRNTSGVILFRTAGSDEEIVSAALIADNNNDEDEAEDAE
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctgttttgcaagagattactttagatattccaattgaggatgaaatgaaaaga
tcttacttagattatgctatgagcgtaatcgtaagtagggcccttccagatgttcgtgac
ggtcttaaacccgtacaccgtaggatcttatactcaatgtatgagtcgggttattattac
aataaacaacatcgtaaatcagctaggattgttggtgatgtaatgggtaagtaccatcct
catggtgatatggctatctatgactctttagttagaatggcacaaaattttgcaatgcgc
atacccttaattgatggtcaggggaattttggttcgattgacggcgactcagccgctgcg
atgcgttatacggaatctaaattaactaagatatcccatacacttcttaacgatatagat
aaaaatacagtcgactttcagcctaactatgatgcaaccgaatcagaacctcaggttctt
cctgcggcgtttcccaaccttttggttaatggatctggtggtattgctgttggtatggct
accaatattccaccgcataatctgtgtgagattatagatgcatgcattgcttacatagat
aataacgaaattaccatagatgaattgatggaaatcatacaaggccctgatttccctact
gctgcaaccattgtgggacgtagcgccattaaatctgcttatcacaccggtaaaggcatt
atttatattcgtggtaaagcttctatcgaagacctagataagagacaagcgatcattatc
gaagaaataccttatgcagttaataaggctaagatgatcgaaaaaattgccgaattagtt
aatactcaaaagatacaaggtataagcaacattcgcgatgaatcagatcgtactggcata
agagttgttgttgagattaaaaaagattttgcagcttcagtaatactgaaccaaatttat
tcatatacacctttgcaagtatcttttggtattaacatggtcgccctggatcaagggata
ccaaaactgatgaaccttaaacaaattattcaaagctttgttgatttcagggaggaagta
ctacgcaaaagaagtatttaccttttaaatcaagctcgagataaagctaatattttattt
gctttgagaattgctataagcaatattgatgaaattattgcaatcatcaaaggatcaaat
gatacagcagaagctcgtgataaattacttgccaaaacctggaacatagaagatttagga
aatcttacagatcttcttggaacattaggtgacacaagagagattagtccacaatacagg
ttttcggaagagcaagtaagggcaattcttgatatgcgtcttcacaagcttacaagttta
gaacactctaaaatcgaggctgactttttaaaattaatgagtgagattaagtacttgctt
agcttgcttgagtcaagagaattattgttaggcgtgatgaaggatgatttacgagaaatt
cgcgaagaatttggaactccaagactaacgcaaattgaagatggagaaatgtctgaccaa
gatattgaggatttgatgcaaaaagaggatatggtagttatttgcactcttggtggctac
attaaaagagtaccattaaatagttaccgtaatcaaaaaagaggaggaaaggggagaaat
actttatctggagaggatattgcaacccaagtttttgttggaacaacacatacacccgta
cttttcttctccacctctggcaaggtatatagcttaaaactttacaaaataccattagga
agcccccaaagtaagggtagggctcttgtaaatctatttcctgatttaaaaccaggtgag
actattaataatattttgctgctacctgagaatgtagcagaattagagaatttgaattta
attttcgcaacagcatcaggttgtgtacgtcgtagctctttagatgatttcaaacgtatc
gcatcaaacggtaaaattgccattagacttgaagaagatgatagcttagttgaagttagc
ttatgcaaatctgatatgcacattttaataagtactaaaatgggccaatctattaggttt
gccgtaagtgatttgcgcgtattcaaaagtcgtacatctgacggcgtgcgggctattaag
cttaaacctaaagaccgagtgattagcatgacaatcttgaagggagctaattacccatta
cttgaacgtgattcatatttaagcataccttatgcaacaagactaaaaatcaaaggagat
ccagaatataacctgaagaaaattgaagaaacttcttctttaactaaagagcaaattaca
gaaatggctcaaaacgaagaagtgatcttttctattacaagtaaaggatttggtaaatgt
agttctgcttatgagtaccgtgttactgctcgtggaggtagcggtgtgagtaacatgaac
acatctaataaaactggtcatttagttactgtagtcccaattacaggtcataatgacgag
gtaattttagtcacaaatactggtaaattaatacgctttaacatagactcaatcagggtg
acaggtcgtaacactagcggcgttatactatttagaacagcaggctcagatgaagaaatt
gtatcagctgcgttgatcgctgataacaataacgatgaagatgaggcagaagatgctgaa
tga
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