Candidatus Phycorickettsia trachydisci: phytr_5400
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Entry
phytr_5400 CDS
T05372
Name
(GenBank) Putative 16S ribosomal RNA methyltransferase RsmE
KO
K09761
16S rRNA (uracil1498-N3)-methyltransferase [EC:
2.1.1.193
]
Organism
ptc
Candidatus Phycorickettsia trachydisci
Brite
KEGG Orthology (KO) [BR:
ptc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptc03009
]
phytr_5400
Enzymes [BR:
ptc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.193 16S rRNA (uracil1498-N3)-methyltransferase
phytr_5400
Ribosome biogenesis [BR:
ptc03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
phytr_5400
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltrans_RNA
PUA_4
Beta-prop_EDC4L
Motif
Other DBs
NCBI-ProteinID:
AVP87485
UniProt:
A0A2P1P8A9
LinkDB
All DBs
Position
complement(603210..603914)
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AA seq
234 aa
AA seq
DB search
MSIKNYRLYIPFNLCEGAIINLDSNLLHYISIVLRLKDNQLIRVFNSKDGEFVAKFSHNK
KDSYLTVTSFMQKSKISPYLHLGIAVLKNSVLPEMINQATQLGVTHITLLQTSYSQNHSL
NIHRYQKIATEAIEQCGRFDLPNISGPIMLDEFLKVDLDLLIFANEKEIDSKLLKVQNWP
ERVGLLIGPEGGFSLEEAQKIQKLPHALSVKLSDNILRAETAATALLAQIVLLR
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgtctattaaaaattatcgtttatatattccatttaatctttgcgagggcgcaattatt
aacctagatagtaatctattgcactacataagtatagtattaaggcttaaagataatcaa
ctaatcagggtatttaacagcaaagatggagaatttgtggctaaatttagtcacaataaa
aaggattcgtatcttactgttacgagttttatgcaaaaatccaagatatctccttattta
catttaggtattgcagttctaaaaaattccgtattacctgaaatgataaatcaagcaact
cagcttggtgtcacgcatattactttattacaaactagttattctcaaaaccactcttta
aatatacatagatatcaaaaaattgcaacagaggcaatagagcagtgtggacgttttgat
ttaccaaatatatcgggtcctattatgctagatgaatttttaaaagtagatctagactta
ttaatttttgcaaatgaaaaagagatagattctaaattgctgaaggttcaaaattggcct
gaaagggtaggtcttttgatcggtcctgagggtggttttagcttagaggaagctcaaaaa
attcaaaagcttcctcatgctttatcggtaaagttatcggataatatattacgggcagaa
actgctgcaaccgccttattagctcagatcgttttgttgaggtag
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