Candidatus Phycorickettsia trachydisci: phytr_5770
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Entry
phytr_5770 CDS
T05372
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ptc
Candidatus Phycorickettsia trachydisci
Brite
KEGG Orthology (KO) [BR:
ptc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptc03400
]
phytr_5770
Enzymes [BR:
ptc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
phytr_5770
DNA repair and recombination proteins [BR:
ptc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
phytr_5770
Prokaryotic type
phytr_5770
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AVP87520
UniProt:
A0A2P1P8B4
LinkDB
All DBs
Position
complement(645350..646768)
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AA seq
472 aa
AA seq
DB search
MSKKITIFWFRYDLRIMDNPGLFEAVHRGAVLPIYILDQEHFTIGEAAKWWLHHSLASLN
KSLDFKLNFYEGNAFDILESLVKNNKDIDAIYWNRCYEPKSIEQDKKIKQYFDKEGLECK
SFNASLLWEPWDIQKGSEGDYYKVFTHFYRNGCLKSNQPRNMVEKPKKLDLIGSNSKTLE
ELNLLPKIKWHRKLEGKYDIGEEGAQKALAQFLSHGLKGYKELRNYPAKPNTSRLSAHLH
FGEISPHNLWHAAQTKGLINGHDADLDHFLSELGWREFSYYVLYHFPELSSKNYQAKFNK
FPWSDDEEAFDKWKRGQTGYPIVDAGMRELWETGFMHNRVRMIVASFLVKNLLQEWRKGL
KWFEECLLDSDMANNSFGWQWVAGCGFDAAPYFRIFNPVLQGEKFDPTGEYTRRFVPELA
NLPNEYLFKPWEASRSVLEGAGITLGVTYPHPIVDAKTSRDRALQAYRELSS
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaaaattacaatattttggtttagatatgatctgcgaatcatggataatcct
ggattatttgaagctgtccacagaggtgcagtgttacctatttatatattggatcaagag
cattttacgataggagaggcggcaaaatggtggttacatcattcactagcaagcttgaat
aaatcattagattttaagttgaatttttatgaaggcaatgcgtttgatatcttagagtca
cttgtgaagaataataaagatatagatgccatatattggaacaggtgctatgaaccaaaa
agtatagagcaggataaaaaaatcaaacaatattttgataaagaaggtttagaatgtaaa
agttttaatgcttctttgttgtgggagccttgggatatacaaaagggaagtgagggtgat
tactataaggtttttactcatttttatcgtaatggttgccttaaatctaaccagccaaga
aacatggttgaaaagcctaaaaaactggatctaataggctctaattctaaaactcttgaa
gagctaaatctattaccaaagataaaatggcatagaaaacttgaaggtaagtacgatata
ggagaagagggtgctcaaaaggccttagctcaattcttatcacacggattaaaaggttac
aaagaattacgcaattatccagcaaaaccgaatacctcaaggttatcagctcatttgcac
tttggtgaaatatcgccgcataacttatggcatgctgctcaaacaaaagggttgattaat
ggccatgatgcagacttggatcattttttaagtgagcttggttggcgcgaatttagctat
tatgtcctgtatcattttcccgaattgtcttcaaaaaattatcaggctaaatttaataaa
tttccttggagcgatgatgaagaagcttttgataagtggaaaaggggtcaaacaggttat
cccatagtagacgcaggtatgagagaattatgggaaactggatttatgcataatagagtg
cgaatgattgtagcttcatttttagtgaaaaatctgcttcaagaatggcgcaaaggttta
aagtggtttgaagagtgtctacttgattctgatatggcaaataatagttttggttggcag
tgggttgcaggatgcggatttgatgcagctccttatttccggatatttaatccggtgcta
cagggtgaaaaatttgatcctacaggtgagtatactaggcgttttgttcctgagcttgct
aatcttcctaatgaatacctttttaaaccttgggaagcaagtagaagtgttcttgaagga
gcgggcattactcttggagtaacttatcctcatcctatagtagatgctaaaacttctcgt
gatagggcattgcaagcttacagagaattaagttcttag
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