Candidatus Phycorickettsia trachydisci: phytr_5840
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Entry
phytr_5840 CDS
T05372
Name
(GenBank) Putative UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-L-lysyl-D -alanyl-D-alanine
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
ptc
Candidatus Phycorickettsia trachydisci
Pathway
ptc00300
Lysine biosynthesis
ptc00550
Peptidoglycan biosynthesis
ptc01100
Metabolic pathways
ptc01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ptc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
phytr_5840
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
phytr_5840
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
phytr_5840
Enzymes [BR:
ptc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
phytr_5840
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
DUF3800
Motif
Other DBs
NCBI-ProteinID:
AVP87527
UniProt:
A0A2P1P8D8
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All DBs
Position
653749..655128
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AA seq
459 aa
AA seq
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MKYIWSKEDLSLALNQDIGFDGGPVSSNSKEIKPGDIFIALKGGKTDGHNYIEDALKRDA
SFVIASHIPSKLKQTEKIIIVEDTYQALLSLAAFRRRQSKAKFISITGSCGKTSTKFYLT
QILSKFAKSTCSQASFNNYLGVPLTLASLPLDAEYVVMEIGTNHLDEIKPLAQLVKSDIA
IITNVLSAHIGNFSSFHELVYEKAQIFQGTLPNAIGIINKSLDTKCLEIIQKEATLNGIQ
KLLYFGGEKSQVDAAVLDYKLLDNSLAQVQIQVGNMILNYTTGVIGKHNAANFLAIILAC
MHLELDLDKVLTSFKDLKNIDGRGKIISVTKFDKSFKIIDDAFNANPGSTSAALENFAHF
QSEQKVVVLSDMLELGKDSLTFHQNLKPTLIKSGAYKFIAVGEMMKHLYDHVEGIEKHFF
QDTNKLLASIHDLIVDGDVLLFKGSKSTNLHQAVDFLKN
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacatttggagtaaggaagacctatctttagcactaaaccaagatataggattt
gatggaggtcctgtgagttctaactccaaggaaatcaagcctggagatatttttatagca
cttaaaggaggaaaaacagatgggcataactatattgaagatgccttgaaacgagacgca
agctttgtaattgctagccatattccttcaaaattaaaacaaactgaaaaaattataatt
gttgaagatacataccaagctcttttatctctggccgctttcagacgcaggcagtcaaaa
gctaaatttatctctattacaggcagttgtggcaagacttcgactaaattctacttaacg
caaattttatcaaaatttgcaaaatctacgtgcagtcaagcaagttttaataactacctg
ggagtacccctaactcttgcatccctgcccttggatgctgaatacgttgtgatggaaata
ggcacaaatcatttagatgaaattaagcctttagcacaattagtcaagtctgatatagcc
ataatcacaaatgttctatctgcacatataggaaatttttcttcttttcacgaactggtt
tatgaaaaagctcaaattttccaaggcaccttacctaacgccataggtatcatcaataaa
tcattagatacaaaatgtttggagattattcaaaaggaagcaacattaaatggcatacaa
aaacttctatattttggaggagaaaaatctcaagtagatgcagccgtacttgattataaa
ttactcgataactctttagctcaagtacaaatccaggttgggaatatgatactcaactat
accactggggtcataggaaaacataatgccgctaattttcttgcgattattctggcttgc
atgcatctagaacttgatttagataaagttttaacatcttttaaagatttaaaaaatata
gacgggagaggtaaaatcatatctgttacaaagttcgataagtctttcaaaataatagat
gatgcttttaatgcaaaccctggatctactagtgctgccttagaaaattttgcacatttc
caatctgaacaaaaagttgtagtattgtcggatatgcttgagttaggaaaagattcctta
acatttcatcaaaatttaaagccaacgcttataaaatctggcgcatataagtttatcgct
gttggagaaatgatgaaacatttatatgatcacgtagagggcattgagaagcactttttt
caagataccaataaacttcttgcttcaatacatgatttaattgtagatggagatgtgcta
ttatttaaagggtcaaagtcgacaaatttacaccaggccgttgattttttaaaaaattaa
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