KEGG   Candidatus Phycorickettsia trachydisci: phytr_5980
Entry
phytr_5980        CDS       T05372                                 
Name
(GenBank) Type IV secretion system protein VirB4
  KO
K03199  type IV secretion system protein VirB4 [EC:7.4.2.8]
Organism
ptc  Candidatus Phycorickettsia trachydisci
Pathway
ptc03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ptc00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    phytr_5980
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ptc02044]
    phytr_5980
Enzymes [BR:ptc01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     phytr_5980
Secretion system [BR:ptc02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   phytr_5980
SSDB
Motif
Pfam: CagE_TrbE_VirB P-loop_TraG AAA_10 AAA_23 KAP_NTPase AAA_22 ABC_tran AAA_7 FtsK_SpoIIIE TrwB_AAD_bind ResIII nSTAND3 AAA_29 SOGA1-2-like_CC DUF87 NPHP3_N nSTAND_NTPase5 AAA_16
Other DBs
NCBI-ProteinID: AVP87539
UniProt: A0A2P1P8E3
LinkDB
Position
complement(676433..678841)
AA seq 802 aa
MFRIFKTQPLKSPYSKKEVSAAKFIPYRCHWNQNTILTKSNELLQVVKINGFAFETADDI
EIEIKKNMRNQLYKNVASGSIVLYFHTIRKRKSLLDSDHVAKSVDRSDFTSYLNHIWNAK
YSTSDSYFNEIYVSILYKPDKAGLAMLEYLVKKFKATSDKHEWEKEMQEMTENIEELTTR
IVNTFSDYGVELLGLRQINGVYYCSILEFLSTIVNCGYNSNVIVPQQTIDGYLCNHRLFF
GNRSIEASGPGGKRYAGIVSVADYGPYTYAGVLDRFLQLPFEFVITQSFVFANRTVAIQK
MQLQQNRMIQSEDKAVSQIKEISVALDMAMSGEISFGEHHFTIMCVEKNVKALENVLSIA
AVELSNCGIRGIRERINLEPCYWGQLPGNSHFLVRKSTINTLNLASFASMHNYPLGKKEK
NHWGEYVTILNTTSGTPYYFNFHVRDVGHTLIIGPTGAGKTVLMNFLCAQAQKFKPRMYF
FDKDRGAEVFIRALRGIYTIIDPGKQCGFNPLQLPDTGENRTFLIEWLKILVSSNGEHVS
AEDVKLLSQAIEGNYRLEQKDRKLCNITAFLGMDGPGTLASRISMWHSRGAYSRIFDNDI
DSIDLSKARIFGFEMAPLLKDPVSLAPVLLYIFHRINLSLTGYPSMIVLDEAWALIDNPI
FGPKIKDWLKVLRKLNTFVIFATQSVEDAAKSKISDTLIQQTATQIFLPNLKATDVYRTA
FMLTQREFNLILKTDPSSRYFLIKQGVGAVVAKVDLSGMSDIINVLSGRSSIITMLDELR
AEHGEDPANWLKIFYRKARSIK
NT seq 2409 nt   +upstreamnt  +downstreamnt
atgtttagaatatttaaaactcagccacttaaatcaccttattctaagaaagaggtttcg
gcagctaaatttataccatataggtgtcactggaatcaaaatactattttgaccaagagt
aatgagttattgcaagttgttaagattaatggatttgcctttgaaactgctgatgatatt
gagattgagatcaagaaaaacatgcgtaatcagctgtataaaaacgttgcatcgggcagt
attgttttatacttccatacaatacgtaaaagaaaatctttgcttgatagtgatcatgtc
gcaaaaagtgtagatagatcagattttacgagctatcttaatcatatttggaatgcaaaa
tattcaacttcggattcatattttaatgaaatctacgtctcaatactctataagccagat
aaagctggtttagctatgcttgagtacttagtgaaaaaatttaaagctacttctgataag
catgaatgggagaaagaaatgcaggaaatgacagagaatattgaggagcttactactagg
attgtaaatactttctctgactatggggttgaacttttgggtttgcgtcagattaatggg
gtctattattgtagcatcttagaatttttaagcacgattgttaattgtggttataattca
aatgtcattgtgcctcaacaaaccatagacgggtacctatgcaatcatcgattatttttt
ggtaatagatcaattgaagcatctgggccaggaggtaaaagatatgcgggtatagtgagc
gttgcagattatggaccctatacctatgctggggttttggatagatttttgcaattgcca
tttgagtttgtcattactcaaagttttgtatttgctaaccgtactgttgcgatacaaaaa
atgcagcttcaacaaaataggatgatccaatcggaagataaggcagtttctcaaattaaa
gaaatttctgttgctctggatatggccatgagtggtgaaatcagttttggtgaacatcat
ttcacaattatgtgcgttgagaaaaacgttaaagctttagaaaatgtgttatccattgct
gcagttgagctttcaaactgcggtattaggggcatacgtgagagaattaatttagagcct
tgttattggggccaattaccgggtaattcacactttttagtacgtaaatcaacaattaac
acattaaaccttgcaagctttgcttcgatgcataactatcctttaggtaaaaaggagaaa
aatcattggggggaatatgtaactattttgaatacgacatccggaacgccatattatttt
aatttccatgttagagatgtgggacatacgttaattattggaccaactggtgcgggtaaa
acggtactgatgaactttttatgtgctcaagctcaaaaatttaagcctaggatgtacttc
tttgataaggatagaggcgctgaggtatttattagagctttaaggggcatttatacaatt
attgatccaggtaaacagtgcggatttaatccacttcagttacctgatactggtgaaaat
cgaactttcttaattgaatggctaaaaattctcgttagtagcaatggagagcacgtatca
gcggaggatgtgaaacttttatctcaagctatagaaggtaattatcgattagaacaaaaa
gataggaaattatgtaacattactgctttcctcggaatggatggtccaggcacgcttgca
agcagaatttctatgtggcatagcagaggagcatattcaagaatttttgataatgatata
gactctattgatttaagtaaggctagaatatttggatttgaaatggctcctttacttaag
gacccagttagtcttgctccagtgcttttatatattttccatagaattaacttatctttg
acgggatatccttcgatgatcgttttagatgaagcctgggcgctaattgacaaccctatt
tttggtcctaaaatcaaagattggctcaaagttctgcgtaaactcaataccttcgtaatt
tttgctacacaaagtgttgaagatgctgcaaaaagtaaaataagtgacactttgattcaa
caaacagcaacacaaattttcttacctaaccttaaggccaccgacgtttatcgtacggca
tttatgcttacgcaaagagaatttaatttaattttaaagactgatcctagttccaggtat
ttcttgattaaacaaggtgttggcgctgttgttgctaaagtagatttgagtggcatgagt
gatattattaatgttttatctggacgctctagtattatcactatgcttgatgaactaagg
gcagaacatggtgaggatcctgctaactggttgaaaattttctatcgcaaagcaaggtca
attaaatga

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