Candidatus Phycorickettsia trachydisci: phytr_8940
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Entry
phytr_8940 CDS
T05372
Name
(GenBank) penicillin-binding protein 1A
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
ptc
Candidatus Phycorickettsia trachydisci
Pathway
ptc00550
Peptidoglycan biosynthesis
ptc01100
Metabolic pathways
ptc01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
ptc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
phytr_8940
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
phytr_8940
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ptc01003
]
phytr_8940
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ptc01011
]
phytr_8940
Enzymes [BR:
ptc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
phytr_8940
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
phytr_8940
Glycosyltransferases [BR:
ptc01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
phytr_8940
Peptidoglycan biosynthesis and degradation proteins [BR:
ptc01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
phytr_8940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
AVP87824
UniProt:
A0A2P1P985
LinkDB
All DBs
Position
1003096..1005393
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AA seq
765 aa
AA seq
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MIKRIFQVLFFLSVCALGAAYLIFDHFSKNLPSYAELANYNPPSVTRIYSSDGKLLQEYA
KERRVFVPIENIPVSLVQAFIAAEDKNFYSHHGIDITSLIRAIINNCIHFIQNKRMEGAS
TISQQVVKMFFLSPERSLKRKIKEAILSYKISQVYSKDKILELYLNQTFFGKGAYGVASA
AKQYFNKPLEELDLGESALLAGLPKYPSLFRSDQNYAKAKARRDYVLRRMEEDGYISHES
ATRATSLPIILSKPLDKDRFQADGYAEVVRKQVIDMLGYDTFYKEGLTIITPLHSEYQKQ
AEKSFIWGIKRYDQTKGFRGPIIHLENIDNWQNDLKNAKIPKLHDDKIAVVLKVSKDQIK
VGTLDDKTWNLQIPKWTATHGLRTGDVIAVTINDHSCTLSQIPEVEGAVIMMDTNTGKVL
AMVSGYDSNTSKFDRATQAQRQPGSLIKPFIYLSALEYGIEPNTIIEDKPIEIYQGPGLP
IYSPQNYGKTFLGPITFRTALEKSRNTVTVQLAKMVGLGNIAEIIKRYGINDDPQKFYSM
ALGSLETTLSKITSAYGGIANGCHKIKTHFIELIKDKHGNIIYKRDNRHYKTSVDQMPQL
SYDPEYINLSDDASCYQIASLLKGAMERGTGASARSLNKVIAGKTGTTNDSLDAWFVGFT
PKIVIGTYVGFDHPKTLGAKATGAGVALPIFVDIFKNAFKDEPSLDFKVPDSISLEYVNP
HTGQKEQTDSSILEAFKKNLFLDENNDPFQKLEPNQKELENFDIY
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaaaggatttttcaggttttattttttctctctgtatgcgctttaggcgcagca
tacttgatatttgatcatttctcgaaaaatctgccaagctacgctgagcttgctaactat
aatccaccttcagttacaaggatatattcatcagatggcaaacttcttcaggaatatgca
aaagagcgtagagtatttgtcccaattgagaacatccctgtgtctttggtgcaagctttc
atagctgcagaagataaaaatttttactctcatcacggtatagatataaccagcctaatc
cgtgcgattattaataattgtatccattttatacaaaataaaagaatggaaggggcatcg
actataagccagcaagtagtcaaaatgttctttttatcccccgaaagatccttgaaacga
aagattaaagaggcaattctatcttataaaatttctcaagtttacagcaaagataaaata
cttgaattatacttaaatcaaacattttttggtaaaggtgcttatggtgttgcaagcgca
gctaagcaatattttaataaacctttggaagagcttgatttaggtgaatcagcactactt
gcaggcttgccaaaatatccttctctctttaggtcggaccaaaactatgcaaaagctaaa
gcgcgcagagattacgtactaaggcgtatggaagaagatggatatattagtcatgagtca
gctacgcgggctactagcttacctattatattaagtaagccccttgataaagataggttt
caagctgatgggtatgcagaagtagtgcgaaagcaagttatcgacatgttaggatatgat
acattttacaaagagggattaacgattatcactccattgcactcagaataccagaaacaa
gccgaaaagtcttttatttggggtatcaaaagatatgatcaaactaaaggatttagggga
ccaattattcaccttgaaaacatagacaattggcaaaatgatctaaaaaatgcaaagatt
cctaaactgcatgatgacaagattgcagtcgtactaaaggtctcaaaagatcagataaaa
gtaggaactttagatgacaagacctggaatttgcaaatacctaaatggactgcaacacat
ggtttaagaactggagacgtaattgcagttacaataaatgatcattcttgcaccctctct
caaattccagaagtagaaggggcggttattatgatggatacaaatacgggcaaagttctt
gctatggtgagtggatatgattccaacacaagtaagtttgaccgcgcaacacaggctcaa
agacaacccggttctctcatcaaaccttttatatatctctcagctttagaatatggcata
gagcctaacacgataattgaagataaacctattgaaatataccaaggaccaggcttgcca
atatatagccctcaaaattatggtaaaactttcttgggccccattacttttagaactgct
ttagaaaaatctcgtaacacagtcactgtacagctagcaaaaatggtaggactaggtaat
attgccgaaattattaaacgctacggtattaatgatgaccctcaaaaattttattcaatg
gctttgggttcacttgagactactttaagtaaaatcactagtgcttacggcggtattgca
aatggatgccataagatcaaaactcattttatagaacttataaaagacaagcacggtaat
atcatatataagagagataacaggcactataaaacttccgtagatcaaatgcctcaacta
agttacgatcctgaatatattaacctttcggatgatgcaagttgttaccagattgcttca
ttactaaaaggagctatggaaagggggactggcgcatcagcaagatcgttgaataaagtt
attgcgggcaaaactggcactacaaacgatagcttagatgcatggttcgttgggtttaca
cctaaaatcgttataggcacttacgtaggctttgatcatcctaaaactctgggggcaaaa
gcaacaggcgcaggtgtagccttaccaatttttgttgatatatttaaaaacgcttttaag
gatgagccatcattagattttaaagtcccagatagcatttccttggaatatgttaatcct
catactggccaaaaagaacaaactgactcttcaattctagaagcattcaaaaagaattta
tttcttgatgagaataatgatccattccaaaaactcgaacctaatcagaaagaattagag
aattttgacatatattaa
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