Candidatus Phycorickettsia trachydisci: phytr_9000
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Entry
phytr_9000 CDS
T05372
Name
(GenBank) hypothetical protein
KO
K11720
lipopolysaccharide export system permease protein
Organism
ptc
Candidatus Phycorickettsia trachydisci
Pathway
ptc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ptc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
phytr_9000
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ptc02000
]
phytr_9000
Transporters [BR:
ptc02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
phytr_9000
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
Motif
Other DBs
NCBI-ProteinID:
AVP87830
UniProt:
A0A2P1P994
LinkDB
All DBs
Position
complement(1011052..1012080)
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AA seq
342 aa
AA seq
DB search
MNICFQYILKSYFKRLFSVLFITALVIYLTNSFELLGRFRDHKPLFLLQLSGLKLPYLIS
EISPLICMLSVLWLVNNLVKQNEFIIFFNNCISIRRIIKYLVLINLCFSLFLLLFISPIS
SRYLAQYDQTIDYLRGYDVSRDNLFFKLKGEKFIHIESLRNNLLSGITIAEVQANDLKRT
TFCSLGRIKQAGQWNLEDCDIKDGNVQTHQDNYILQTNVKKKDIRYFEYSPYHLPFWNLP
NLVVSLQKLGMPSSFVELYFYKQITRPLVVILFSLMPFFFFDLEKHKIWLNSSYVIVASF
TGFLFLSVIANILTHYTNSAVLCSIVPIAVFLFFILFRISHI
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaatatttgttttcagtatatactcaagtcttattttaaaagactgtttagtgtatta
tttatcactgcactcgtaatttatttaactaactcttttgaattactgggaagattcagg
gatcacaaacctcttttcttacttcagctgtctggacttaagcttccttatctcatttct
gagataagtcctttgatttgtatgcttagcgttttgtggcttgttaataacttagttaag
cagaatgaatttataattttttttaataactgcatttccatccgtcgcattataaaatat
ctagtccttattaacttatgctttagtttgtttttattactctttatatcacctatatca
agcaggtatcttgcacaatatgaccaaactatagactacttaagaggctatgatgttagt
cgcgataatttattttttaagttaaaaggagagaaatttattcacatagaaagcttaaga
aataatttactttctggtattacgatagcagaagtacaagccaatgatcttaaacgtact
actttctgtagcctaggcagaattaagcaagccggtcagtggaacctggaggattgtgat
attaaggatggaaatgttcaaactcatcaagacaattatattttgcaaactaatgttaag
aaaaaagatattagatatttcgaatatagtccttatcatttaccattctggaatttacct
aatttggttgtttcgttacaaaaattaggtatgcctagtagttttgtagagctttatttt
tataaacaaattacaagacctcttgtggtaattttattttcattgatgccgtttttcttt
tttgacttagaaaaacacaaaatatggcttaatagttcttatgtaattgttgcaagtttt
actggatttttatttttaagcgtaatagcaaatatcctaacgcactatactaattctgct
gttttatgtagtatagttcctatagctgttttcttattttttatattatttagaatttcg
catatataa
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