Pseudoalteromonas tetraodonis: PTET_a0012
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Entry
PTET_a0012 CDS
T05282
Symbol
fadB
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
ptd
Pseudoalteromonas tetraodonis
Pathway
ptd00071
Fatty acid degradation
ptd00280
Valine, leucine and isoleucine degradation
ptd00310
Lysine degradation
ptd00362
Benzoate degradation
ptd00380
Tryptophan metabolism
ptd00410
beta-Alanine metabolism
ptd00640
Propanoate metabolism
ptd00650
Butanoate metabolism
ptd00907
Pinene, camphor and geraniol degradation
ptd00930
Caprolactam degradation
ptd01100
Metabolic pathways
ptd01110
Biosynthesis of secondary metabolites
ptd01120
Microbial metabolism in diverse environments
ptd01200
Carbon metabolism
ptd01212
Fatty acid metabolism
Module
ptd_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
ptd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
PTET_a0012 (fadB)
00650 Butanoate metabolism
PTET_a0012 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
PTET_a0012 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PTET_a0012 (fadB)
00310 Lysine degradation
PTET_a0012 (fadB)
00380 Tryptophan metabolism
PTET_a0012 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
PTET_a0012 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
PTET_a0012 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PTET_a0012 (fadB)
00930 Caprolactam degradation
PTET_a0012 (fadB)
Enzymes [BR:
ptd01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
PTET_a0012 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
PTET_a0012 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
PTET_a0012 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
PTET_a0012 (fadB)
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Phage_T7_tail
Motif
Other DBs
NCBI-ProteinID:
ATD01619
LinkDB
All DBs
Position
I:complement(11667..13826)
Genome browser
AA seq
719 aa
AA seq
DB search
MLYKSDSFEVSFVKENIAEFKFCATGSVNTLSQQTLSDCAAALKELAANADIKGMIFTSD
KDHFIIGADIFEFLPTFTKPEAELVTWIKDATDVFDAIEDLPFPTLSVINGLALGGGCEW
ALATDYRVASDSAKMGLPEVKLGIMPGFGGTVRLPRIIGADNAMMWITTGNENRAADALK
VGAFDAVVSASKLQESSIATLELAIAGKLDWQAKRAVKLQPLKLNRVEQGMSFAMAEGMV
MGKTKGHYPAPVMAVRTIKAAANCSRAEAMAIENANFAKLARTNEAAAQTGIFLADQYIK
GKARKFAKHSDVEIKQAAVLGAGIMGGGIAYQSAYKGTPIIMKDIQQDALDLGMGEASKL
LGAKVKRGHMPMEKMLATLSKIKPTLNDADLQNANIIVEAVVENPKVKQAVLADLEKNMP
EGTVLTSNTSTICIDLLAEALEKPENFCGMHFFNPVPKMPLVEIIRGAKTSDKTINAVVD
YALKLGKSPIVVNDCPGFFVNRVLFPYFAGFSKLVVEGANFAKVDKVMENVFGWPMGPAY
LLDVVGIDTAFHCTGVMADGFPERMARAEKDPVTVFANEKRFGQKNKAGFYKYETDRRGR
LKKSHDQTAIELLAPITDAPKEFDKQEIIDRCMIPMINEVLLCLQEGIVASPQEADMALV
YGVGFPPFRGGAFRYLDQTGLANFVAAADKYAHLGAIYQVSEQTRKWAEEGRVFYKVEG
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgttatataaaagcgattcctttgaagttagcttcgtgaaggaaaacatcgccgagttt
aagttttgtgctacaggttctgtaaacacattatctcaacaaactctttcagattgcgcg
gcagcattaaaagaattagccgctaacgctgatattaaaggcatgatttttaccagtgat
aaagaccactttattattggtgcagatatcttcgaatttttacctacttttactaaacct
gaagcagaattagtaacgtggatcaaagatgcaactgacgtttttgatgcaattgaagat
ttaccattcccaacactaagtgttataaacggcttggcgcttggcggcggctgtgagtgg
gcacttgctaccgattatcgtgttgcaagtgactcagcaaaaatgggtttaccagaagtt
aaattaggcataatgcctggatttggcggcacagtgcgccttccgcgcattattggtgcc
gataacgcgatgatgtggatcaccacaggtaacgaaaatcgcgcagctgatgcccttaaa
gtaggtgcgtttgacgcagtagttagtgctagcaaactacaagagtcaagtatagcaaca
ttagaattagcgattgctggcaagctagattggcaagcaaaacgcgctgtaaaattacaa
ccgcttaaattaaaccgtgttgagcaaggcatgagctttgcaatggcagaaggtatggta
atgggtaaaaccaaaggccactatcctgctccagttatggccgttcgcactattaaagcg
gcagcaaactgctcacgcgccgaagcaatggcaattgaaaatgccaactttgcaaagctt
gctcgtaccaacgaagcagccgcgcaaacaggtatctttttagcggatcaatacattaaa
ggtaaagcacgtaaatttgctaagcacagcgatgtagaaattaaacaagctgctgtatta
ggcgcaggtattatgggcggcggtattgcataccaatctgcttataaaggtacaccaatc
atcatgaaagacatccaacaggatgcacttgacttaggtatgggtgaagcgtctaagcta
ttaggtgcaaaagttaagcgcggccatatgccgatggaaaaaatgctagcaacgcttagc
aaaatcaaaccaacgcttaatgatgcagacctacaaaacgccaacattattgttgaagcg
gtagtagagaaccctaaagtgaagcaagccgtacttgctgatcttgaaaagaatatgcca
gaaggcactgtgctcacgtcaaatacatcgactatttgtattgacctacttgcagaagca
cttgaaaaaccagaaaacttctgtggtatgcactttttcaacccagtaccaaaaatgcca
ttagtagaaattatccgtggtgcaaaaacctcagataaaaccattaatgccgtggttgat
tacgcacttaaactaggtaaatcgccgattgttgttaacgattgcccaggcttttttgta
aaccgtgttttattcccttactttgcaggctttagcaaattagtggttgaaggcgctaac
tttgcaaaagtagataaagtcatggaaaacgtatttggctggcctatgggtccggcttac
ctacttgatgtagtcggtattgatactgctttccattgtactggcgtaatggcagacggc
ttccctgaacgtatggcacgtgcagagaaagatccagtgactgtttttgctaacgaaaaa
cgttttggtcaaaagaacaaagcaggtttttacaagtatgaaacagaccgtcgcggtcgt
cttaaaaaatcgcatgaccaaacagcgattgaactacttgcaccaattacagacgcacca
aaagaatttgataaacaagaaatcattgaccgttgtatgatcccaatgatcaacgaagtg
ctactttgtttacaagaaggcattgttgcttctcctcaagaagctgatatggcacttgta
tacggtgttggtttccctccatttagaggcggcgcgttccgttacttagatcaaacaggt
ttagctaactttgttgcagcagcagacaaatacgctcacctaggtgcgatttaccaagta
tcagagcaaactcgcaagtgggctgaagaaggccgtgttttctataaggtggaaggttaa
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