Pseudoalteromonas tetraodonis: PTET_a0103
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Entry
PTET_a0103 CDS
T05282
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ptd
Pseudoalteromonas tetraodonis
Pathway
ptd00300
Lysine biosynthesis
ptd00470
D-Amino acid metabolism
ptd01100
Metabolic pathways
ptd01110
Biosynthesis of secondary metabolites
ptd01120
Microbial metabolism in diverse environments
ptd01230
Biosynthesis of amino acids
Module
ptd_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ptd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PTET_a0103 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PTET_a0103 (dapF)
Enzymes [BR:
ptd01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
PTET_a0103 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
RnlA_toxin_N
Motif
Other DBs
NCBI-ProteinID:
ATD01702
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Position
I:complement(93618..94448)
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AA seq
276 aa
AA seq
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MLVNFSKMHGLGNDFVVIDNITQNVFLSRDQIKKLADRHFGIGFDQLLMVEAPYSPDLDF
HYRIFNADGHEVEQCGNGARCFARFVRMKGLTNKHKISVSTKSGNLTLYIEKDGQVTVNM
GHPNFEPSKIPLKATKRELTYIIRAEEHTVFSGAVSMGNPHCVMEVDDIETAQVSTLGPL
LENHERFPQRANIGFMQVISQEHIKLRVWERGVSETLACGTGACAAMVIGFIQNKLTSTV
QVDLPGGSLQVRWSGEGHPVRMTGPAEHVFDGQVAL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgttagttaatttttccaaaatgcacggcttaggtaacgactttgttgtgattgataat
attacacaaaacgtttttttatcccgtgatcaaatcaaaaagctggccgatcgccatttc
ggcattgggtttgaccaattactgatggttgaagccccttactcacccgatctcgatttt
cactatcggatttttaatgccgacggccacgaagtagaacaatgtggtaacggcgcccgt
tgctttgcccgctttgtgcgcatgaaaggcttaaccaataaacataaaattagcgtttca
actaaatcgggtaacctcaccctgtatattgaaaaagacggccaagtaacggttaacatg
ggacaccctaattttgagccgagtaaaatcccgcttaaagcaaccaaacgtgagctgact
tatattattcgtgcagaagaacataccgtttttagtggtgctgtttctatgggtaacccg
cattgcgtcatggaagtagacgacattgaaacggcacaagtgagtacccttggcccgttg
cttgaaaatcatgaacgttttccacagcgcgcaaatattggctttatgcaggttatttct
caagaacacattaaactcagagtgtgggaacgtggtgtaagcgaaacacttgcttgtggt
accggtgcgtgtgccgctatggtgattggctttattcaaaacaagctcaccagcacagtg
caagttgatttaccaggcggtagcttacaagttcgctggagtggcgaaggccacccagtg
cgtatgacaggccccgctgaacatgtatttgatggacaagttgcactatga
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