Pseudoalteromonas tetraodonis: PTET_a1209
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Entry
PTET_a1209 CDS
T05282
Symbol
truB
Name
(GenBank) tRNA pseudouridine55 synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ptd
Pseudoalteromonas tetraodonis
Brite
KEGG Orthology (KO) [BR:
ptd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ptd03016
]
PTET_a1209 (truB)
Enzymes [BR:
ptd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PTET_a1209 (truB)
Transfer RNA biogenesis [BR:
ptd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PTET_a1209 (truB)
Prokaryotic type
PTET_a1209 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ATD02687
LinkDB
All DBs
Position
I:1158586..1159530
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AA seq
314 aa
AA seq
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MARRSKGRPVDGILLLNKPEGISSNKALQQAKGIYFAQKAGHTGALDPLATGMLPICFGE
ATKFTQFLLDTDKTYVVRAKLGERTTTSDSDGEVVETRDVNVTAELLTQEIAKFLGESDQ
YPSMYSALKYEGKPLYKYAREGIEVPRKCRKINVFSLTLDEFDEQANEIQMTAHVSKGTY
IRTIVDDLGENLGCGAHVIMLHRSAVGHYPADKMVTLEQLETLLNQAKEQDVAPSTYLDE
LLLPMDTALVDLPVVEITKEQGIAFSHGQAVVLGKELPEGAIKVLADGIFIGTGERNPDG
HLKSKRGLSNQQPE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggcaagacgcagtaaaggccgtccagttgatggtattttgttgttaaacaaaccagaa
ggtatttcatcaaacaaagcactgcagcaagcgaaaggtatttattttgctcaaaaagcg
gggcacactggtgcgctcgatccgcttgcgaccggtatgctgcctatttgttttggtgaa
gccactaagtttacccagtttttactcgatacagataaaacctatgttgtgcgagcaaaa
ctgggtgagcgtactaccacgtcagactctgatggtgaagtggtcgaaacgcgtgatgtt
aatgttactgctgaactgcttacacaggaaattgctaaatttttaggtgagtcagatcaa
tacccatcaatgtactcagcgcttaaatatgaaggcaagcctttatataaatatgcgcgt
gaaggcatagaagttcctcgcaaatgtcgaaaaattaacgtatttagcttaacgcttgat
gagtttgatgagcaagccaacgaaatacaaatgactgcccatgtatctaaaggcacatat
attcgtactatcgttgatgacttaggtgaaaaccttggctgcggcgcgcatgtgattatg
ctgcatcgtagtgctgtagggcattacccagcagataaaatggtcacacttgagcagtta
gaaacgttattaaatcaagcgaaagaacaagacgttgcgccttctacttaccttgacgaa
ctattattgccaatggataccgcgttagttgatttacctgttgtggaaattactaaagag
cagggaatagcatttagccatggtcaagctgtggtgctaggtaaagaattacctgaaggt
gcaataaaagttctggctgacggaatctttattggtactggtgaacgtaatcctgatggc
catctaaaatcaaaacgtggcttgtctaatcagcaaccagagtaa
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