Pseudoalteromonas tetraodonis: PTET_a1240
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Entry
PTET_a1240 CDS
T05282
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ptd
Pseudoalteromonas tetraodonis
Pathway
ptd03030
DNA replication
ptd03430
Mismatch repair
ptd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PTET_a1240 (dnaQ)
03430 Mismatch repair
PTET_a1240 (dnaQ)
03440 Homologous recombination
PTET_a1240 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptd03032
]
PTET_a1240 (dnaQ)
03400 DNA repair and recombination proteins [BR:
ptd03400
]
PTET_a1240 (dnaQ)
Enzymes [BR:
ptd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PTET_a1240 (dnaQ)
DNA replication proteins [BR:
ptd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PTET_a1240 (dnaQ)
DNA repair and recombination proteins [BR:
ptd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PTET_a1240 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RNase_H_2
vATP-synt_AC39
DUF6922
Motif
Other DBs
NCBI-ProteinID:
ATD02713
LinkDB
All DBs
Position
I:1184598..1185311
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AA seq
237 aa
AA seq
DB search
MARRQIVLDTETTGIDPKQGHRIIEIGCVELMNRRLTGNNFHVYINPQRSIEEEAIDVHG
ITNEFLRDKPLFRDIAQEFFDYIKDAELVIHNAPFDIGHMDNEFALLNQGYQNTHDFCGV
LDTLKMARDLHPGQKNNLDALCRRYDVDNTKRTLHGALLDSEILADVYLAMTGGQVKLNL
NQNKDDSSEDQKGGIRRLNSDRAPLVVVAASEAEQSAHQSRLDIVQKEGGHCLWRAE
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcagacaaatagttttagatacagaaaccaccggcatcgaccctaaacaaggg
catcgtattattgagattggctgtgtggagctaatgaatcgtcggttaaccggcaataat
tttcacgtttacataaatccacaacgcagcattgaagaagaagcaatcgacgttcacggt
attaccaacgaatttttacgtgacaaaccgctttttagagacattgcccaagagtttttt
gactatattaaagacgcagaactcgttattcataacgcgccgttcgatattggccatatg
gataatgaatttgcgttattaaatcaaggttatcaaaacacccatgatttttgtggcgtg
cttgatacccttaaaatggcgcgtgacttgcatccaggacaaaagaacaacctagatgcg
ctttgccgtcgctacgatgttgataacactaagcggacgttacacggcgccttactggat
tctgagattttagccgatgtttacctggcaatgaccgggggacaagtaaagctaaatcta
aatcaaaataaagatgactcaagtgaagatcaaaagggcggtattaggcgcttaaacagc
gatagagcccctttggttgttgtagcagcaagcgaagcagagcaaagcgcacatcaatca
cgtttagacattgtacaaaaggagggcggccattgtttatggcgcgctgaataa
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