Pseudoalteromonas tetraodonis: PTET_a1391
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Entry
PTET_a1391 CDS
T05282
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
ptd
Pseudoalteromonas tetraodonis
Pathway
ptd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PTET_a1391 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptd03400
]
PTET_a1391 (recC)
Enzymes [BR:
ptd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PTET_a1391 (recC)
DNA repair and recombination proteins [BR:
ptd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PTET_a1391 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ATD02849
LinkDB
All DBs
Position
I:1349579..1352878
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AA seq
1099 aa
AA seq
DB search
MLNIIQSNRMEALQAQFHQLLKINPLQSPFDKEVVLVQSPGMSQWLKIGLSENLGVAAQV
DFPLPSSFIWQLYQQLLPNVPKESAFNKPNLAWKLFAILPTCIDEPLFLPLKTYLEGDID
GQKTFALCEKIADVYDQYLMYRPHWIATWDSGVDTLDDVDISIAPWQPDLWRRLVKLSKT
LGQSQFHRANMQGQLLSALESMDGSLLPKRISLFGISAIASSQLDVFEALSKKTEVFLFF
FNPSEHYWGDIIDEKTAAKINAKYAKMPLVEAQQKKQTNPDEEYYFIGNPLLSSWGKLGR
DYFEQLVQLDARWIDGFIDAFDDTLLGQVQSEIYQLAFKGESLTDNKEWFINDEGKLPIS
AHDTSITLSDCHTPLREVERLHDYLLNLFNQNPTLTPKDIIVMMPDVGTYSPYIEAVFGG
AQGSRFIPYALADLAIEQEKPVLSSFASLANLPFSRFGVSDILDLLQVTQIAEKFGLEAH
EYEQIHYWLERVGVKWGINAEHKQSFDLPAIDLNTWQHGLNRLLLGIAMRDEQCPFNGIY
SADEVEGMALDTLNKLVHFIDVLQDFKAKLTPDDTLTNKAHILSELLNAVYESESDDSWD
LLVLQKVLEDIAKHHDNGDYSKAVSQRIVSYLIKQGIQEKGVGQRFLVGQVNFCTLMPMR
AVPFKVVCMLGLNDADYPRTVQPIGFDLVPYSKKQKGDRSRKLDDRYLFLEALLSARDNL
YMSYIGRSCFDNQPRMPSTLVSELLEYIGRSFKLSEPSDKPLPECLITQQHLQPFNSLYY
SAPSDEQAGVNNHSYNPIWLPSEAIEPKVITALDVMPPELLDLDMFIRSVCHAQESFYQQ
SLGLRLPQFNDIAKDEEPFSLDALRRYFYLDEILEANINNTPLSTEQILQRGELPQAHVG
SLIYESMQHRVDALAGQVKQQIKAGKSEPIEVLLLLENTTIEGWLNHVYMQKQVFYRSAS
IKAKDLIKGFIYHLAAQSMQQEVETLLLGLDKQISFAPMSKADADLLLADWFELYKALRN
KPVAFFPVSGYEYVKSGGDMAKANSKFSPQYIGRGEGENPYIRLTVQSLNDCQDEFIHWS
DKLLAPLFEHAKESDYASA
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atgctcaatattattcaatcaaaccgtatggaagccctgcaagcgcagtttcatcaactg
ttaaaaataaacccattgcaaagcccatttgataaagaagtggtgttagtgcaatcgccg
ggtatgtcgcaatggcttaaaataggtttaagtgaaaatttaggcgtagctgcacaggta
gactttccgctaccatcgagttttatttggcagttgtaccagcaactattgccaaacgtg
cctaaagagtcggcgtttaataaaccgaaccttgcttggaaactgtttgcaattttacct
acttgtattgacgagccactgtttttacccctaaaaacctatttagagggggatattgac
ggccaaaaaacctttgccctatgtgaaaaaatagccgatgtgtacgaccaatatttaatg
tatcgcccccattggatagccacttgggatagcggggttgatacgcttgacgatgtagat
atcagcattgctccttggcaacccgatttgtggcgccgccttgttaaattaagtaaaaca
cttgggcaaagccaatttcaccgcgccaacatgcaaggacaattactcagcgcccttgag
agtatggatggcagcttattgccaaagcgtattagcctatttggtatatcggcgattgcc
agctcacagcttgacgtgtttgaagccttgagtaaaaaaactgaggtgtttttattcttt
tttaaccccagcgagcattattggggcgatataatcgatgaaaaaacagcggctaaaata
aacgctaaatacgccaaaatgccgctggtggaagcgcagcaaaaaaagcaaacgaatcct
gatgaagaatactattttattggtaatccgttgttgtcctcgtggggtaaactcggccgc
gattattttgagcaactggtgcagcttgatgcccgttggattgatggttttattgatgcg
tttgacgataccttacttgggcaagtgcaaagcgaaatataccaacttgcctttaaaggt
gaatcgcttaccgataacaaagaatggtttataaacgatgagggtaaactgcccataagt
gcacacgataccagcattacgttaagtgactgccacacgccattaagggaagtcgagcgc
ctgcacgactacttactcaatttgtttaatcaaaacccaacgcttacccccaaagacatc
attgtgatgatgcctgatgtaggtacttatagcccttacattgaggccgtttttggtggt
gcgcagggcagtcgatttataccatacgcccttgccgatttagccatagagcaagaaaaa
ccagtactgagctcgtttgccagtttagctaatttaccgttttcgcgctttggcgtgtcg
gatattcttgatttattacaggttacgcaaattgccgaaaaatttggcctagaggcccat
gaatacgagcaaatacattattggcttgagcgagtaggggtaaagtggggtataaacgct
gagcataaacaaagctttgatttacccgccattgatttaaatacctggcaacatggcttg
aaccgcttattactggggattgccatgcgcgacgaacagtgcccatttaatggcatttac
agcgccgatgaagtagaaggtatggcgcttgatactctcaataagctggtgcattttatt
gatgtgcttcaagactttaaagcgaaactcacccctgatgatacgcttaccaataaagcc
catatattaagtgagctactcaatgctgtgtatgagagcgaaagcgatgatagctgggat
ttattagtgctgcaaaaagtgctcgaagacattgcgaagcaccacgacaacggcgactac
agtaaagccgtttcgcagcgcatagtgagctatctaatcaagcaaggtatacaagaaaaa
ggtgtaggccagcgctttttagtaggacaagtgaacttttgtactctcatgcccatgcgt
gccgtgccgtttaaggtggtgtgtatgctaggcttaaacgatgccgattacccgcgcacg
gtgcagccaatcggatttgatttagtgccgtattctaaaaagcaaaaaggtgatcgttca
cgtaaactcgatgaccgttacctctttttagaagcgctcttaagtgctcgagataattta
tatatgagctacattggccgctcgtgttttgacaaccagccgcgcatgccatcaacgctt
gtcagtgagcttttagaatacattggacgcagttttaaacttagcgaacccagtgataaa
cccttgcctgaatgccttattacgcagcagcatttgcagccttttaatagtctgtattac
tcagctcctagcgatgaacaggcgggagtaaataatcacagctataacccaatttggctg
cctagcgaggctattgagccaaaagtaatcactgcacttgatgtaatgcctccagagttg
cttgatcttgatatgtttattcgcagtgtgtgccacgcccaagagagcttttatcagcaa
agcctagggttacgtttgccgcaatttaacgatatagccaaagatgaagaaccgtttagc
ttagatgcgctgcgccgttacttttaccttgatgaaatacttgaagcaaacattaacaat
acgccgctcagtaccgagcaaatactgcagcgcggtgagttgccgcaagctcatgttggc
agcttaatttatgagagcatgcaacatcgcgttgatgcgcttgcagggcaagtaaaacaa
caaataaaagcgggtaaaagcgaaccgatagaggtgttacttttgcttgaaaacaccacc
attgaaggctggttaaaccatgtgtatatgcaaaaacaagtgttttatcgcagtgctagt
attaaagctaaagatttaattaaaggctttatttatcatcttgctgcacaaagcatgcaa
caagaggttgaaactttattgctaggtttagataaacaaattagttttgccccaatgagt
aaagccgatgccgatttactgctcgcagattggtttgagctttataaagcattacgcaac
aagcccgtggcgttttttccggtaagtggttatgaatacgtaaaaagcggtggtgatatg
gcaaaagccaacagtaaatttagtccacagtatattggccgaggcgaaggagaaaaccct
tatattcgtctcacggtgcaatcacttaatgactgccaagacgaatttatacattggagc
gataagctactcgccccattattcgagcacgccaaggagagtgactatgcaagcgcttaa
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