Pseudoalteromonas tetraodonis: PTET_a2327
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Entry
PTET_a2327 CDS
T05282
Name
(GenBank) ATP-dependent helicase IRC3
KO
K19789
DNA repair protein RadD
Organism
ptd
Pseudoalteromonas tetraodonis
Brite
KEGG Orthology (KO) [BR:
ptd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptd03400
]
PTET_a2327
DNA repair and recombination proteins [BR:
ptd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
PTET_a2327
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
ERCC3_RAD25_C
AAA_22
SLFN-g3_helicase
AAA
AAA_30
ATPase_2
TniB
zf-tcix
DZR
Zn_ribbon_3
UPF0547
Motif
Other DBs
NCBI-ProteinID:
ATD03672
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All DBs
Position
I:complement(2249974..2251725)
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AA seq
583 aa
AA seq
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MTYTLRPYQQEAVERTVLHFRKTNDPAVIVLPTGAGKSLVIAELARIAKQKILVLAHVKE
LVEQNAQKYKSFGLEASIFSAGLKEKSLTHQVTFASVQSLSRNLDKLNEHYSLLIIDECH
RVNGEKKSQYGKVINALKFHNPELKVLGLTATPYRLGLGWIYQHHYHGFVRGNKESPFKH
CIFELPLRYMIKHNYLTPPKEVDAAISHYDFSSLTSNAFGQYSNEDMNALLKKSTRATQT
ILQQVIQYSENRYGVMIFAATVMHAQEIMTYLPEDHSALITGDTPNSERDKIIKQFKAKK
LKYLVNISVLTTGFDAPHVDFIAILRPTESVSLYQQIVGRGLRLAEGKDDCLVIDYAGNG
FDLFYPEVGDKKGDSDNEPVQVLCPGCGFANIFWGKTDADGKVIEHFGRRCKGLLEDDNG
LSEQCDYRFRFKECEQCGAQNDIAARKCHDCNAVMADPDDKLRNALNLKDALVLRCSGLS
VVKLKEQLLKITYFDEDGASCDEIFDLSNKGARYYFHQQFGKRVSLGQSPIEFTSAEQVI
KAQFDLIPPDFVIARKSKKYGWKVADKLFDYKGSFRKANQLSR
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgacctacacccttagaccctatcagcaagaggcggttgaacgcaccgttttacacttt
agaaaaaccaatgatcctgctgtcattgtgctgcctacaggtgcgggtaaaagtttagtg
atagctgagcttgcgcgtattgctaaacaaaaaatattggtgttggcgcacgtaaaagaa
ttagttgagcaaaatgctcaaaagtataaaagctttggtcttgaggcgagtatattttcc
gcaggattaaaagagaagtcgttaacccatcaggtcacttttgcgagtgtgcagtcgtta
tcacgtaatttagacaaacttaatgagcactactcactacttattattgatgagtgtcac
agagtaaatggcgaaaagaaaagccaatacggtaaggttattaatgcacttaaatttcac
aaccctgaattaaaagtattaggcttaacagcaacgccttaccgccttgggttaggctgg
atttatcagcatcattaccatgggtttgtaagaggcaataaagagagtccattcaaacac
tgtatttttgaattacctttgcgctatatgatcaagcataactatttaacgccccctaaa
gaggttgatgctgcaattagccattatgatttttcatctttaactagcaatgcatttggg
caatatagcaatgaggatatgaatgcgctgttaaaaaaatcgacccgtgcaactcaaaca
attttacaacaggttatacaatacagtgaaaatcgttacggcgtgatgatttttgcagct
acggttatgcatgcacaagagataatgacttatctaccagaggatcacagtgcgctgatc
acgggggatacgccaaatagcgaacgcgataaaataattaaacaatttaaagctaaaaaa
ttaaagtatttagtgaatatatcggttcttactaccggctttgatgccccccatgttgat
tttattgctattttacggcccacagagtcggtaagtttataccagcaaattgtcggtaga
ggcttgaggttggctgagggtaaagatgattgtttagtgattgactatgcgggcaatggc
tttgatttattctacccagaagtgggagataaaaaaggcgatagcgataatgaacccgtg
caagtgctgtgtcctgggtgtggctttgccaatatattttggggcaaaacagatgctgat
ggcaaagtaatcgagcacttcggcaggcgttgtaaaggtttgctagaagatgataacggt
ttaagcgagcaatgcgattaccgctttcgttttaaagagtgtgagcagtgcggcgcacaa
aatgatatagctgctcgaaaatgccatgattgtaatgctgtgatggccgacccagatgat
aagctgcgcaatgcgttaaaccttaaagatgcattagtcctacgttgtagcggcttgagt
gtggtaaaacttaaagagcaattgttaaaaattacttattttgatgaagacggagccagt
tgtgatgaaatttttgatttatcaaacaaaggtgctcggtattactttcatcagcagttt
ggtaagcgtgtaagtctgggccaatcccccattgaatttaccagtgcagagcaagttata
aaagcgcagtttgatttaataccaccggattttgtgattgcgcgaaaaagtaagaaatat
ggctggaaagtagcagataaactttttgattataaaggcagcttcagaaaagcaaaccag
ctaagtcgatag
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