KEGG   Pseudoalteromonas tetraodonis: PTET_a2640
Entry
PTET_a2640        CDS       T05282                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
ptd  Pseudoalteromonas tetraodonis
Pathway
ptd03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ptd00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    PTET_a2640 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptd03019]
    PTET_a2640 (rnc)
   03009 Ribosome biogenesis [BR:ptd03009]
    PTET_a2640 (rnc)
   03036 Chromosome and associated proteins [BR:ptd03036]
    PTET_a2640 (rnc)
Enzymes [BR:ptd01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     PTET_a2640 (rnc)
Messenger RNA biogenesis [BR:ptd03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     PTET_a2640 (rnc)
Ribosome biogenesis [BR:ptd03009]
 Eukaryotic type
  90S particles
   RNase
    PTET_a2640 (rnc)
 Prokaryotic type
  rRNA processing factors
   PTET_a2640 (rnc)
Chromosome and associated proteins [BR:ptd03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     PTET_a2640 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DSRM_2 RM44_endonuclase DND1_DSRM
Other DBs
NCBI-ProteinID: ATD03949
LinkDB
Position
I:complement(2546730..2547407)
AA seq 225 aa
MKKNVTELYKRIGYTFADQGLLEQAMTHRSHKGQHNERLEFLGDSILSFVIANALYAKFP
KAREGDLSRMRSTLVRGQTLAEFGLEFELGDYLRLGPGELKSGGFRRESTLADAVEAIIG
AVFLDSDIDRCGELILAWYESRLDAISPGLNQKDPKTLLQEYLQARKLSLPGYTVVDTKG
QAHNQTFTVECIVDGMDSIISVGSSRRKAEQKAAEKALKILKNES
NT seq 678 nt   +upstreamnt  +downstreamnt
atgaaaaaaaatgtaacagagttatacaaaagaattggctacacatttgctgatcaaggg
ttacttgagcaagcaatgacgcatcgcagccacaaaggtcaacataacgagcgactcgaa
tttttgggcgactcaattttgagctttgtcattgccaatgcgctgtacgctaaatttcct
aaagcacgcgaaggcgatttaagtcgaatgcgttcgactttagttcgcggtcagacgtta
gctgaatttggccttgaatttgagcttggtgattacctacgcttaggtcctggcgagcta
aaaagtggtggttttagacgcgagtcaaccctagcggatgcagttgaagctattattggc
gctgtatttttagattcagacatagatcgctgcggcgagcttattttagcgtggtatgaa
tcacgtttagatgctatttcaccagggcttaaccaaaaagatcctaagaccctgctgcaa
gagtatttgcaagctcgtaagctatcattaccaggctacaccgtagttgatactaaaggt
caggcacacaatcaaacattcacggttgaatgtatcgttgatggaatggatagcattatt
tctgttggcagctcacggcgtaaagccgaacaaaaagcggccgaaaaagcattgaagata
cttaaaaatgaatcttga

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