Pseudoalteromonas tetraodonis: PTET_a3125
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Entry
PTET_a3125 CDS
T05282
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma-32 factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
ptd
Pseudoalteromonas tetraodonis
Brite
KEGG Orthology (KO) [BR:
ptd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptd03021
]
PTET_a3125 (rpoH)
Transcription machinery [BR:
ptd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PTET_a3125 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
GntR
Motif
Other DBs
NCBI-ProteinID:
ATD04365
LinkDB
All DBs
Position
I:complement(2995381..2996244)
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AA seq
287 aa
AA seq
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MSKDLYAMALTVGQQSASMDGYLQAVSTIPMLKVEQEQELAKKLQEEGDLSAAKQLIMSH
LRFVAHIAKSYSGYGLPQADLIQEGNIGLMKAVKRFDPSVGVRLVSFAVHWIKAEIHEFV
LKNWRIVKVATTKAQRKLFFNLRKNKKRLGWFNQAEVSTVASELGVSEKEVREMESRMSG
QDMGFDLTGDDNDDAPTSTYSPVQYLTDGSADLADDIEQQQWQEQSHTRLFSALKTLDER
SQDIVSARWLSDDKATLQELAEKYSVSAERVRQLEKTAMKKLQSAMS
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagatttatacgcaatggcacttacagttgggcaacaaagcgcaagtatggat
ggctatcttcaggctgttagtactattcctatgcttaaagttgagcaagagcaggaactt
gcaaaaaaacttcaggaagaaggcgatcttagtgctgcaaagcaactcattatgtcgcat
ttgcgctttgtagcgcacatagctaaaagctactcgggttacgggttaccccaagctgat
ttaattcaagagggtaacattggactgatgaaggcagtaaaacgttttgacccatcagtg
ggtgtacgtttggtttcatttgcggttcattggatcaaagccgaaattcatgagtttgtg
cttaaaaactggcgtatcgtaaaagttgcgacaaccaaagcgcaacgtaaactgtttttt
aatcttcgtaaaaacaaaaaacgtttaggctggtttaatcaagccgaagttagcacagta
gcgagcgagctaggtgtgagtgaaaaagaagtgcgtgaaatggaatcgcgtatgagcggc
caagacatgggctttgacttaacgggcgacgataacgacgatgcgccaaccagtacttac
tcaccggtacaatacttaaccgatggttctgctgacttagccgatgatattgagcagcaa
caatggcaagagcagtcgcatacgcgattatttagcgctttgaaaaccctcgatgagcgt
tctcaagatatcgttagcgcacgctggttgtcagatgataaagcaacactgcaagagttg
gctgaaaaatacagcgtatcagcagagcgtgttcgccagctggaaaaaacagcaatgaaa
aaattacaaagtgcgatgagttaa
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