Pseudoalteromonas tetraodonis: PTET_b0074
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Entry
PTET_b0074 CDS
T05282
Symbol
sbcD
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
ptd
Pseudoalteromonas tetraodonis
Brite
KEGG Orthology (KO) [BR:
ptd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptd03400
]
PTET_b0074 (sbcD)
DNA repair and recombination proteins [BR:
ptd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PTET_b0074 (sbcD)
Archaeal homologous recombinant proteins
PTET_b0074 (sbcD)
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Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
ATD04804
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All DBs
Position
II:complement(67024..68271)
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AA seq
415 aa
AA seq
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MKVLHTSDWHLGQQFYEHDRRHEHHAFFSWLLTTLVNQQIDLLLVAGDIYHTATPSANAE
NQLYQFIKNAKAQCPQLHVVIIAGNHDSANRILAAQPLLAQFDTHVVGRFDPAKPSDVVV
TINNDDKRAVVLAMPFLRTSDISTLSQTENGPSYAQGVAKAYELALEHALTLNAENKPLI
VMGHLHAKGGNISGDSERNLVIGGEEAISASVFGKQANYVALGHLHKAQLVAKNEQIRYS
GTPIPMSFSERKYTHQVNVVEFSEQKNQPLNTTVNPLYIPRLAEVIVLPEGECVPLAQLC
EQIKALDTEQYDIAPYLRVKLKSSDIDTTFREQIEQALKGKQVNFCGIERVRDQQMSNSS
ETVFEDLSFVEMLNPISLLEQAFNNDKDMAAATVPNELKALLTDVIEELEQEQLL
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttcttcacacttcagactggcacctaggtcagcaattttatgaacatgatcgc
cgtcatgagcaccatgcttttttctcttggctgttaaccaccctcgttaaccaacaaatc
gatttattgcttgttgcaggtgacatttatcatactgccacaccgagtgctaacgccgaa
aaccaactctatcaatttataaaaaacgccaaagcccagtgcccacaattacacgttgtt
attattgcgggtaatcatgactccgctaatcgtattttggctgcacaacccttattagcc
cagtttgatactcatgtggtagggcggtttgatcctgctaaacccagtgacgttgtagta
acgattaataacgatgataaacgcgctgtggtactcgctatgccttttttacgcacaagt
gacataagtacgcttagccaaaccgaaaatggccccagttacgcacagggcgttgcaaaa
gcctatgaacttgctcttgaacatgcgctaacacttaacgctgaaaataagcctttaatt
gttatgggtcatttgcatgcaaaaggcggtaatatttccggtgactctgaacgtaatttg
gtcattggcggtgaagaagctatttcagcgtcggtatttggtaagcaagccaattacgtc
gcactaggccacttacataaagcacaactagtagctaaaaatgagcaaatacgttacagc
ggcacgcctattccaatgtcgttttcagaaagaaagtatacccatcaagtaaatgtggtt
gaatttagcgagcaaaaaaaccaaccgttaaacaccactgtaaaccccctttacattccg
cgcttagctgaagtcattgtacttcctgaaggagaatgtgtgcctttagcgcagctgtgt
gagcaaataaaagcactcgatacagagcaatacgacattgctccttacttgcgagtaaaa
cttaaatcaagtgatatcgataccacctttcgagaacaaatcgagcaagcacttaaagga
aaacaggttaatttttgtggcatagagcgagttcgtgaccagcaaatgagtaattcctca
gaaacggtatttgaagatttaagttttgtggaaatgctcaacccaattagcttactcgaa
caagcatttaataatgataaagatatggccgcagcgaccgtgcccaatgaattaaaagca
ctgttaaccgacgtaattgaagaacttgaacaggagcaactgctatga
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