Pyrenophora teres: PTT_01206
Help
Entry
PTT_01206 CDS
T01613
Name
(GenBank) hypothetical protein
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
pte
Pyrenophora teres
Pathway
pte03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pte00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PTT_01206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pte03009
]
PTT_01206
Ribosome biogenesis [BR:
pte03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
PTT_01206
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_2nd
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
WD40_Gbeta
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Utp12
Beta-prop_CAF1B_HIR1
Beta-prop_EML
ASA1
DSE1_N
Beta-prop_WDR41
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_NOL10_N
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_Aladin
Beta-prop_Vps41
Beta-prop_SCAP
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_VPS8
WDR54
Beta-prop_SPT8
PEP5_VPS11_N
CFAP251_N
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_Nup120_160
RMC1_N
Beta-prop_RIG_1st
Beta-prop_EIPR1
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Beta-prop_IP5PC_F
Beta-prop_ACSF4
PROPPIN
DNAI3_WD
BCAS3_WD40
RelA_RIS
Utp21
Beta-prop_LRRK2
Rtf2
DIKK1-2-4_C-subdom1
Motif
Other DBs
NCBI-ProteinID:
EFQ96434
UniProt:
E3RCW0
LinkDB
All DBs
Position
Unknown
AA seq
959 aa
AA seq
DB search
MVKSYSKYEQTDAFGVVATATSNIVWTPEGLTQPGSSRAAGAGRAYAAANEEVLCWDIKK
SELVSRWRDNSCTEQVTVICRSDVDPDVFAVGYTDGSIRIWDARTSTVIISFNGHKSAVT
VLTFDQSGVRLASGSKDTDIVIWDLVSETGLFKLRGHKGQITGLHFLHPGSASDEDGEVD
MDADQAFLLSTSKDALIKIWDVATQHCIETHIAQTNGECWALGVSPDGSGCITAGNDGEL
KVWAIDQSGLRQAASALGEGADREYLTSRGMLYRQGKDRTQCISFYDRADYIAVHGAEKA
VEIWRIKSPEEVRKSLVRKRKRKREKSKNETNGEAQEEIDEDKVNAADAEIGEVFVPYVT
VRTAGKVRSVAWMHIKGTKKLQLLVGTNNNLLDVYEIPQRSKSKSEEAPDYSRTLSVELS
GHRNDVRALALSSDDRMLASASSGGLKIWNIKTQNCLRTLECGYALCCAFLPGDKIVVVG
TKDGDIELYDIAASTLLDKISAHEGAVWTMQVHPDGKSLITGSADKSVKFWNFDIVQEEI
PGTKRTTPRLKLTESRILKVNDDVLSIQVSPDSRLLAVATLDNTVKVFFVDFLKLFLNLY
GHKLPVLNMSISGDSKLIATCSADKNVRIWGLDFGDCHKALFGHEDSIMQISFIPHPVDG
EERHIFFSASKDRTIKSWDGDKFQQIQKFRGHHGEIWAMTVARTGDFLVTASHDKSLRIW
TRSDEPIFLEEERERELEEMYEKTLATSLEDDENNENPSAAEAVDASKQTITTLTAGERI
QEALDLGIPDLELVQNWELQRRSNPKLAPPQRNPLYLALGNVSAERHVLSTMAKIPAAQL
HDALLVLPFSSLPALFTFLAIWVRKQWNVTLTCRVLFFMLKTHQKQIVASRELKTVLEAM
RSDLRSMLSQNKDLVGFNVAALRFVGERVEERGLVRWEDVERVEEEGKGRRKRGFVDVA
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaatcatacagtaaatacgagcaaaccgacgcttttggtgtagtcgcgactgcc
acttcgaacattgtatggaccccagaaggccttacacagcctggatcatctcgagccgca
ggcgccggacgcgcatacgccgccgcaaatgaagaagtgctgtgttgggatatcaagaag
agcgagctcgtaagcaggtggcgcgacaactcctgcacggaacaagtgactgtcatctgc
aggagcgacgtggacccagatgttttcgccgtgggctacacagacggaagcatacgcata
tgggatgcacgaacgtcgaccgtcatcatcagcttcaacggacacaaatccgccgtcaca
gtcctcactttcgatcagagcggagtacgcctagcgagtggctccaaggacacagatatc
gtcatatgggatctggtctcggaaactggcctgttcaagctgagaggacacaagggtcag
atcaccgggctacactttcttcatcctggtagcgcatcagacgaagacggcgaagtagat
atggacgctgatcaggcattcttactctccacgagcaaagatgctttgatcaaaatatgg
gacgtcgctacacaacactgcatcgagacgcacattgcacaaacaaacggagaatgttgg
gcactcggcgtctcaccagatggtagcggttgcataacagctggtaacgacggtgagctc
aaggtatgggctatcgatcaatctggtcttcgacaagcagcttcagccttaggagaagga
gcggaccgggagtatctcacgtcgagaggcatgttgtatcgacagggcaaggacaggacg
caatgcatatccttctacgacagggctgattacattgcggtacacggtgcggagaaggct
gtggagatctggcggataaaaagtccagaagaggtcaggaaaagcttagtaaggaagagg
aagagaaagcgggaaaagtccaagaacgagaccaacggcgaggcgcaagaagagatcgac
gaagacaaggtcaatgcagcagatgcggagattggcgaggtcttcgtgccctatgtgaca
gtgcggacagctggaaaggttaggtcggtcgcgtggatgcacatcaagggcacgaagaag
ctgcaactacttgtcggcacaaacaacaacctcttggacgtttacgagataccccaacga
agcaagtcgaagagtgaggaggcaccagattacagtaggacactatctgtcgaactctcg
ggccacagaaacgatgtacgcgcgctcgctctcagctcagacgaccgcatgttggcatct
gcgtcaagtggaggactcaagatctggaatatcaaaacccagaactgtctgcgtacgctg
gagtgcgggtatgctctatgttgcgcatttctgcccggagacaagattgtggtagtgggc
accaaggacggcgacatcgagttatacgacatagcggcttccacactgctcgacaagatt
tcagcgcacgagggagcagtatggacgatgcaagttcaccccgacggcaagtcactcatc
actggtagtgcggacaagtctgtcaagttctggaactttgacatcgtacaggaagagatt
ccagggacaaagcgcacaacaccgcgtttaaagctcacggaatctcgcatactcaaggtc
aacgatgatgttctgagcatacaggtctcacctgactcacggttgctagcagtagcaact
ctcgacaataccgtaaaagtcttctttgtagatttcctgaagcttttcctcaacctttac
ggtcacaagctgcccgtcctcaacatgtcaatatctggcgacagcaagctcatcgcaacc
tgttccgccgataagaacgtccgtatctggggtctcgattttggagactgccacaaagcg
ctcttcggccacgaggacagcatcatgcaaatctccttcatcccgcaccctgtcgacggc
gaggaacgccacattttcttcagcgcctccaaagaccgaacaattaagagctgggatggt
gacaaattccagcaaatccaaaaattcagaggccaccacggcgaaatctgggccatgacc
gttgcccgaacaggcgacttcctcgtcaccgccagccacgacaagagtctccgcatctgg
acgcgctccgacgagcccattttcctcgaagaagaacgcgaacgcgaactagaagaaatg
tacgaaaaaactctcgccacctccctcgaagacgatgaaaacaacgagaacccatccgcc
gctgaagcagtcgatgcctcgaaacaaacaatcaccaccctcaccgccggtgagcgcatc
caagaagccctcgacctaggcatcccggacctcgaactggtccagaactgggagctacaa
cgccgttcaaaccccaaactcgctcctcctcaacgaaaccccctctaccttgccctcggt
aacgtatcagccgaacgccacgtcctcagcaccatggcaaaaatccccgctgcacaactc
cacgacgccttactcgtcctacctttttcttccctccccgcgctcttcactttccttgcc
atctgggttcgcaaacagtggaatgttacgcttacctgtcgcgtcctcttcttcatgctc
aagacgcatcagaagcagattgtcgcatcccgcgaactcaagactgtgttggaggctatg
cgcagcgatttgaggagtatgttgagtcagaataaggatttggtagggttcaatgttgcc
gcgttgaggtttgtgggagagagggtcgaggaaagggggttggttaggtgggaggatgtt
gagagggttgaggaggaggggaaggggaggaggaagagggggtttgttgatgttgcgtga
DBGET
integrated database retrieval system