KEGG   Pyrenophora teres: PTT_03997
Entry
PTT_03997         CDS       T01613                                 
Name
(GenBank) hypothetical protein
  KO
K14405  pre-mRNA 3'-end-processing factor FIP1
Organism
pte  Pyrenophora teres
Pathway
pte03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pte00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    PTT_03997
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pte03019]
    PTT_03997
Messenger RNA biogenesis [BR:pte03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     PTT_03997
SSDB
Motif
Pfam: Fip1
Other DBs
NCBI-ProteinID: EFQ95954
UniProt: E3RE88
LinkDB
Position
Unknown
AA seq 317 aa
MADESDDDLYGDETTTQQKKQIAKEEEASSGDEPMDEESGDDDDSDSDIDIIIEKAPAPA
KPTASQHTQQESKAIKIEAPPPSTTPSQQQVPTRTVPTSSGTVPQLSASALSGTAFPAQR
TSTIDVNGNPIYPPQGKEILSIDIDANLAEEQKIWRRPGEDQSDYFNYGFDEFTWELYRQ
RQVNMANTLQGQKNDMAQMQAMMGGGPMPGMPAMGGGPQGNAGPGGVPPTGPGGGGGGGG
GMGGPAGMNEQQMQMMMQEMMAQGMDPSQMDFASFMQMAGQGMGGFPGGPGGQQGGGFPQ
GHQGGGGRGGRGRGRGW
NT seq 954 nt   +upstreamnt  +downstreamnt
atggcggacgaatccgacgacgatctgtacggggatgagactacgacacagcagaagaag
cagatagcaaaagaagaggaggcatccagcggcgacgaacccatggacgaggaatcaggc
gacgatgacgatagtgactcggatatcgacattatcattgaaaaggcacctgcgcccgcc
aaacccacagcttcccagcacacgcaacaagaatccaaagccataaaaatcgaagcacca
cccccctccactaccccctcccaacaacaagtccctacaagaacagtacccacaagcagc
ggcaccgtgccccaactctccgcctcggccctctcaggcaccgcattccccgcccagcgc
acctcgaccatcgacgtaaacggcaacccaatctacccaccgcagggcaaagaaatcctc
tccatagatatcgatgcgaatctagccgaggagcaaaagatctggcgccgaccgggtgaa
gaccagtctgattacttcaactacggtttcgacgagttcacatgggagctatacaggcaa
cgacaggtcaacatggccaatacactgcaaggacagaagaacgacatggcacagatgcaa
gcgatgatgggcggaggacccatgccaggtatgccagccatgggcggaggaccccaggga
aacgctggaccaggtggtgtgccgcctactggacctggaggaggtggcggcggcggcggt
ggcatgggtggtcctgctggcatgaacgaacagcaaatgcaaatgatgatgcaagaaatg
atggcacagggcatggatccaagtcaaatggactttgcttctttcatgcagatggcaggt
cagggtatgggcggcttccctggtggaccgggtggacagcaaggcggagggttcccacaa
ggacaccaaggaggaggtggaaggggtggacgaggaaggggaagaggatggtag

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