KEGG   Pyrenophora teres: PTT_05673
Entry
PTT_05673         CDS       T01613                                 
Name
(GenBank) hypothetical protein
  KO
K12857  Prp8 binding protein
Organism
pte  Pyrenophora teres
Pathway
pte03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pte00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PTT_05673
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pte03041]
    PTT_05673
Spliceosome [BR:pte03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    PTT_05673
 Complex C
   U5 SnRNP specific factors
    PTT_05673
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WDR55 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_SPT8 NBCH_WD40 Beta-prop_DCAF4 Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st WDR90_beta-prop_4th WD40_RFWD3 Beta-prop_WDR35_TULP_N Beta-prop_Vps41 PEP5_VPS11_N Beta-prop_WDR75_2nd Beta-prop_IP5PC_F VPS11_N Beta-prop_BBS7
Other DBs
NCBI-ProteinID: EFQ95644
UniProt: E3RF55
LinkDB
Position
Unknown
AA seq 359 aa
MSKEKRPAHEAFGTSQLVKRTKSDANLAGSSAVAVVNGSRANGALIQAEPRTSALQSPVM
ELTGHSGEIFAARFDPTGQHIASGSMDRSILLWRSSGSCENYGILTGHKQAVLDLHWSRD
SKVLFSASADMYLASWDVETGERIRRHPGHEEVINCMDVSKRGEEMLVSGSDDGYIGIWD
TRTKDAVTFIPTDFPITAICLAEAGNELFTGGIDNDIKVWDLRKQAVTYTLLGHTDTVTS
LQMSPDKQTLLSNAHDSTVRTWDVRPFAPADRRIQTYDGAPTGQERNLLKASWDPKGEKI
AAGSGDQSVAIWETRTGKLLNKLPGHRGAVNDVRFHPLGEPILVSVSSDRKLIVGELGK
NT seq 1080 nt   +upstreamnt  +downstreamnt
atgtccaaggaaaagcgacctgcgcacgaagcattcggcaccagtcagctggttaagcgc
acaaagtcggacgccaacctcgcaggaagctctgctgtagctgtagtgaacggttcgcgc
gcaaatggcgccctcatccaagcggagccgcgtaccagcgcgctgcagtcgcccgtcatg
gagctgacaggccattctggtgaaatcttcgcagcccgattcgacccgaccggacagcac
atagcttctggatccatggaccggtcaatattactttggcgcagctctgggtcttgcgaa
aactacggtattctcactggacacaaacaggcagtactagacctgcactggtcgcgcgac
tcaaaggtcttattctccgcctcggcagacatgtacctagcaagttgggatgtggagact
ggcgagaggatacggagacacccaggtcacgaagaggtcatcaactgcatggatgtgagc
aagcgtggtgaggagatgctcgtcagtggctctgatgacggctatatcgggatctgggac
acacgaaccaaggatgcggtaaccttcatccctacggatttccccataacggctatatgc
ttggcggaagccggcaacgagctattcactggaggcattgacaacgacatcaaggtctgg
gaccttcggaaacaagcggttacgtacacactgcttggtcacaccgacaccgtcacctca
ctccaaatgtccccggacaaacaaaccctactatccaacgcacacgattcgactgtacgg
acgtgggatgtgagaccctttgcgcctgcggatcggcgcatccagacatacgatggagcg
ccgaccggccaggagcgcaaccttctaaaggcaagctgggatcccaagggcgagaagatt
gcggcaggaagtggagaccaaagtgtcgccatttgggagacgcgtacaggaaagcttcta
aacaagttgcctggccaccgaggtgctgtcaacgacgttcgcttccacccgctcggtgaa
ccgattttggtctccgtatcctcggatcgcaaactcatagtaggagagctaggcaagtga

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