Pyrenophora teres: PTT_06546
Help
Entry
PTT_06546 CDS
T01613
Name
(GenBank) hypothetical protein
KO
K11593
eukaryotic translation initiation factor 2C
Organism
pte
Pyrenophora teres
Brite
KEGG Orthology (KO) [BR:
pte00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pte03019
]
PTT_06546
03036 Chromosome and associated proteins [BR:
pte03036
]
PTT_06546
Messenger RNA biogenesis [BR:
pte03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
PTT_06546
Chromosome and associated proteins [BR:
pte03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
PTT_06546
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
PTT_06546
microRNA pathway
RISC loading complex
PTT_06546
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
ArgoN
ArgoL1
ArgoL2
PAZ
ArgoMid
HTH_OrfB_IS605
Motif
Other DBs
NCBI-ProteinID:
EFQ95468
UniProt:
E3RFN2
LinkDB
All DBs
Position
Unknown
AA seq
1049 aa
AA seq
DB search
MSNAPRGGGDRGRGNFRGDRGGSRGGGRGDFGGRGGGGFRGDRGGGGGDRGRGGFRGDRG
GGGGDRGRGGFRGDRGGGGGGFRGGRGGGPPSGPVPNEVFANPGVIDSKVAKVEDAMHPI
AKKTLDLGSLKLSEGNPTRPGYGTKGIKVELTANYVELLPPSNMVLYRYDIDVSPDATGR
KRHRLVELLLQTPEMTPYNGNVATDFRSTMVSKTKLRHDEDVVEVQYRSEGEDEPAANAA
VYKIRVKYTNTLSVGELVDWMNSTNTAEFGDKQDITQALNIFINHYAKSAKTLATIGSSK
SFSLGQNATKGDLGSGLEVIRGFFSSVRVATCRILVNINVSHGAFYIAGSLPALMHSYGI
HNTGGLEKFLKLVRVQTSHLAEKKNRAGQVIPRVKTIFGLARKDDGHKLANRPRVTKHGA
GAKEVEFWLDGEASASAPKPSAEGAKGKGKGKVPTKGPATSGRYISVFDFFKQTYNRVLK
NPELPVINCGNRENPMYLPAEVCNVVPGQPSKAKLDGPQTQQMIRYAVRKPWDNARSIQN
EGIATVGLDANTNLLLRSFGLQVGPGLIKVPGRILNGPKVIYKGNKVADPRFGSWNMINI
KFNTGAALVNWSYVMISLPRGRDSFDANGLMNVMQEFHQGLVKIGLTASAPLPGQRLMLQ
HTDDANLGPFMTRAAAGLDLLFIVLPEANIPLYKRIKSIADRECGLHTICSVGSKLAKDR
GRDQYIANVALKINLKLGGINQIVENKNLGIIDQNKTMVVGIDVTHPSPGSASNAPSVSA
MVASVDKFLGQWPATLRIQRGRQENVDDLSEMLKSRLNLWKTKGKHTTLPENILIYRDGV
SEGQYDMVLAQELPQLRKACEQMYPATDTKKGLPRFTVVICGKRHKTRFYPTKEQDCDRS
GNTKPGTVVDRGVTDARNWDFFLQAHAALQGTARPCHYYIVHDEIFRQVYAKQIPAPFGN
ITDIVEDLTHNMCYLFGRATKAVSLCPPAYYADLACERARCYLASLFDTPTPSAAPSLAG
TSVAGGAGAAPDASDVQIHSKLRDTMFYI
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacgcaccgcgaggtggcggcgacagaggccgcggtaacttccgtggtgatcgt
ggggggagtcgtgggggaggaagaggcgatttcggaggtcgtggagggggtggattccga
ggtgacaggggaggaggaggaggagacagaggacgtggtgggttcagaggggataggggc
ggaggaggaggagacagaggacgtggtgggttcagaggggataggggcggagggggaggt
ggcttccgtggtggaaggggaggaggcccgcccagtggtccagtccccaacgaggttttt
gcaaacccaggggtcatcgattccaaggtagcaaaggttgaagatgctatgcatccaatc
gcgaaaaagacgctcgatcttggtagtctaaagctgtccgaagggaatccaacccgtcca
ggttatggcaccaagggcatcaaggttgagctcacggccaactatgtcgagttattgccc
ccatccaatatggtactatacaggtacgacatcgatgtgtctccagatgccactggcagg
aagcgccaccgccttgtggagcttcttctccaaacaccagagatgacgccatataacggg
aacgtggctactgatttccggtctacaatggtctccaagactaaattgaggcacgatgaa
gatgtcgtcgaggtccaataccgatctgaaggcgaagacgagcccgcggcgaacgcagct
gtctacaaaatccgtgtcaaatacacaaacaccttgagtgtcggcgagttggtcgattgg
atgaactccacaaatacggctgagtttggagacaaacaggatattacacaggccctgaac
atcttcattaaccactatgccaaatcagccaaaacactggcaacgattggctcatcaaag
agcttctcccttggtcagaacgccaccaaaggagacctcggttccggcttagaagtcatc
cgcggcttcttctcaagtgtgcgcgtggccacttgccgtatcttggtcaatatcaacgtt
agccatggtgcattttacattgcgggctcgttaccagcactaatgcatagttacggcata
cataacaccggcggcttggagaaattcctcaagcttgttcgcgttcaaacctcgcatctc
gccgagaagaagaacagggctggtcaggttatccctagggttaagacgatattcgggctt
gcaaggaaggatgatggtcacaaactggcgaatcgaccacgagtcaccaagcatggtgca
ggcgccaaggaggtagagttttggcttgatggtgaagctagtgcttcagcacccaagcca
agcgcggaaggtgcgaaaggaaaaggaaagggaaaggtcccaaccaaggggcctgcgacc
tctgggaggtacatcagcgtgtttgactttttcaaacagacctacaacagggttctcaag
aatccggaactgccggtgatcaattgcggcaaccgcgagaaccctatgtatctgccagcg
gaagtctgcaacgttgtgccaggtcagccgtccaaggcaaagctcgacggccctcagacc
cagcaaatgattcgttacgctgttcgtaaaccatgggacaatgctaggtcgattcagaat
gaggggatagccactgtaggattggatgcgaacacaaacttacttcttcgctcgttcggt
ctccaagtcggcccaggacttatcaaggtccctggtcgcatcctcaacggccccaaggtc
atctacaaaggcaacaaggtggctgatccacgcttcggcagttggaacatgatcaacatc
aagttcaatacaggcgcagcactcgtaaattggtcatacgtgatgatctcacttccccgt
gggcgagactcattcgacgcaaatggtctgatgaatgttatgcaagaattccaccagggc
ttggtaaagattggcctaaccgctagtgcgccacttccaggtcagcgcctgatgctgcag
catacagatgatgctaatctcggcccgttcatgacacgcgctgctgctggattagacctt
ttgttcatcgtcttgcccgaggccaacataccactttacaagcgtatcaagtcgatcgcc
gacagagaatgtggcctacacaccatctgctccgttggttccaagctcgccaaggatcgc
ggacgggatcaatacatcgccaacgtggccctgaagatcaacctgaagctcggcggcatc
aaccaaattgttgagaataaaaatttgggcataattgatcagaacaagacaatggtcgtg
ggtatcgatgtcacgcacccttcgcctggctctgcatccaatgcgccttccgtctcggct
atggtggcctccgttgacaagttcttgggtcaatggcctgcgactttgcgcatccaacgc
gggcgacaggagaacgtggatgatctctccgaaatgctcaaatcacgcctcaacctgtgg
aagaccaagggcaaacacactaccctccccgagaacatcctcatttaccgcgatggtgtc
tcagaaggacagtacgatatggtgcttgcccaggaacttccccagctacgcaaggcatgt
gagcaaatgtacccggcgaccgacaccaagaagggtcttccacgcttcacggttgtcatc
tgtggcaaaagacataagactcgtttctacccgaccaaagaacaagattgcgacaggtcc
ggtaacaccaaacccggcaccgttgttgatcgcggtgttacagatgcgcgaaactgggat
ttcttcctccaagcccatgccgcactccagggaactgcccgcccttgccactactacatt
gttcacgatgaaatcttccgtcaggtctacgcgaagcaaatcccggcaccctttggcaac
attacggatatcgtcgaagatcttacacacaatatgtgctacttgtttggtcgcgcgaca
aaggccgtgagcttgtgtccaccggcgtactatgctgatttggcgtgtgagcgtgcccgc
tgctatctggctagtctattcgatacacccacgccgagtgcggcgccgtctctcgctggc
acatctgttgctggaggtgctggcgctgcgcctgatgcgtctgatgtgcagattcactcg
aagctcagagataccatgttctacatctag
DBGET
integrated database retrieval system
