Pyrenophora teres: PTT_06559
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Entry
PTT_06559 CDS
T01613
Name
(GenBank) hypothetical protein
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
pte
Pyrenophora teres
Pathway
pte03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pte00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PTT_06559
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pte03041
]
PTT_06559
03009 Ribosome biogenesis [BR:
pte03009
]
PTT_06559
Enzymes [BR:
pte01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PTT_06559
Spliceosome [BR:
pte03041
]
Complex A
U2 snRNP components
U2 related factors
PTT_06559
Complex B
PTT_06559
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
PTT_06559
Ribosome biogenesis [BR:
pte03009
]
Eukaryotic type
90S particles
Helicases
PTT_06559
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
AAA_22
SRP54
HA2_N
AAA_19
Flavi_DEAD
AAA_23
T2SSE
AAA_7
nSTAND3
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
EFQ95450
UniProt:
E3RFP3
LinkDB
All DBs
Position
Unknown
AA seq
763 aa
AA seq
DB search
MSKREYDDQDSARVKRVKTESNGEAKMDAAANPYLAHWDEKPVKSEYSGSGSGLQGFKRH
ATTTAQANAAEDGPNNAFTGRPLSNKYMSILKKRRELPVHQQRDEFLKLYQESQILVFVG
ETGSGKTTQIPQFVLFDDLPQQNAKMVACTQPRRVAAMSVAQRVAEEMDVELGEEVGYSI
RFEDKTGPNTILKYMTDGMLLREAMNDHNLTRYSTIILDEAHERTLATDILMGLLKEVVL
RRPDLKLIIMSATLDATKFQKYFHNAPLLAVPGRTHPVEVFYTPAPERDYVEAALRTVLQ
IHATEPEGDILLFLTGEEEIEDACRKINLEAQDLSREGGAGPLVVYPLYGTLPPAQQQKI
FNPAPPPATPGGRPGRKCIVSTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVS
PISKASAQQRAGRAGRTRPGKCFRLYTEAAFKKELIEQTYPEILRSNLASTVLELKKLGV
DDLVHFDLMDPPAPETLMRALEELNYLACLDDEGELTTLGGLASQFPLDPALAVMLITSP
EFYCSNEILSLTALLSVPQIFVRPANNRKRADEMKELFAHPKGDQLTMLNVYHAFKSEEA
QANPKQWCHDHFLSYRALQQADNVRMQLKRIMEREELELMSTPFENKKYYENIQRALVAG
FFMQVAKRDGNGKSYITVKDEQQVLLHPSTVLAEDSEWVIYNEFVLTTKNYIRTVTSVKP
EWLIDISPNYYDLSQFKKGEIKTALQRVVTKVQRKEAEKGGRR
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagcgcgaatatgacgaccaagacagcgctcgcgtcaagcgtgtaaagacagaa
tccaacggcgaggccaagatggacgcagcggcaaatccttacctggcgcactgggacgag
aagcctgtcaagagcgagtatagcggttcgggaagcggattgcaaggcttcaagcgccat
gcgacgacgactgcgcaggccaatgccgctgaagatggcccgaacaacgccttcaccggc
cgcccgctctcgaacaagtacatgagcatcctcaagaagcgacgagaactgcccgtgcac
cagcagcgcgatgagtttctcaagctctaccaggagtcgcaaattcttgtctttgttggt
gagactggttctggaaagacaacacagattccccagtttgtgctcttcgacgacctccca
cagcagaatgcgaagatggtggcgtgcacgcagccacgtcgtgtcgccgccatgtcggtg
gctcagcgtgtggccgaggaaatggacgtcgaactgggagaggaggtcggatacagcatt
cgtttcgaggacaagacgggtccaaacaccatcctcaagtacatgacggatggaatgttg
ctgcgcgaggccatgaacgaccacaaccttacccgctatagcaccatcatcctcgacgaa
gcccacgagaggacgctggctaccgatatcctaatgggtctgctgaaggaggtagtgctg
aggcggcctgatctcaagctcatcatcatgagtgctactctcgatgccacaaagttccaa
aagtacttccacaacgccccgctgcttgccgtacctggtcgaacccaccctgtcgaggtc
ttctacacacctgcgcccgagcgcgactacgttgaggctgctctgcgaactgtcctccaa
attcatgccaccgagccggagggcgacattctgttgttcctgactggtgaggaggagatt
gaggatgcatgcaggaagataaatctagaggctcaggacctcagccgggagggtggtgcc
gggccgcttgtggtatacccactctacggaactctgccacccgcgcagcaacagaagatc
ttcaacccggcgcctcccccagcaacacccggcggtcgacccggtcgcaaatgcattgtt
tccacaaacattgccgagacatcccttaccattgacggtattgtctacgtcgtggaccca
ggtttcagcaagcaaaaagtttacaacccccgtatccgcgtcgagtctctgttggtatca
cctatttcaaaagcgtctgcacaacagcgcgctggacgtgctggacgtacccgacctgga
aaatgcttccgtctgtacaccgaggctgcctttaagaaggagctcatcgagcagacctat
cctgagattctgcgatccaacttggcgagcacagtccttgagttgaagaagcttggtgtc
gatgatctggtacattttgacttgatggatcccccggcgccagagacgttgatgcgcgcg
ttggaggagctcaactacctggcctgcttggacgacgagggtgaactgactacccttgga
gggctcgcctcacagttccctctggatcccgcgttggccgtcatgctcatcacatcaccc
gagttctactgttcaaacgagattctatcgcttaccgcactactctccgtcccccagatc
tttgttcgcccggccaacaaccgcaagcgcgcagatgagatgaaggaactctttgcacac
cccaagggcgaccagctgactatgctcaacgtctaccacgctttcaaaagtgaagaagca
caggcgaacccgaagcaatggtgccacgaccacttcctatcgtaccgagcactacaacaa
gccgacaatgtccgcatgcagctcaagcgcataatggagcgagaggagcttgagctcatg
tcaacaccctttgagaacaagaagtactacgaaaacatccagcgcgcacttgtagccggc
ttcttcatgcaagtcgctaagcgcgacggcaacggcaagagctacatcaccgtcaaggac
gaacagcaggttctgctacatcccagcacagtccttgcagaggacagcgagtgggtcatc
tataacgaattcgtcctcacgaccaagaactacatccgaactgtgacatcggtcaagcca
gagtggctaatagatatctcaccgaactactacgatttgtcgcagttcaaaaagggcgaa
atcaagacggctctgcagcgcgtggtcaccaaggttcagcggaaggaggctgagaagggt
ggccgaagatag
DBGET
integrated database retrieval system
