Pyrenophora teres: PTT_07093
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Entry
PTT_07093 CDS
T01613
Name
(GenBank) hypothetical protein
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
pte
Pyrenophora teres
Pathway
pte03022
Basal transcription factors
pte03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pte00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PTT_07093
09124 Replication and repair
03420 Nucleotide excision repair
PTT_07093
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pte03021
]
PTT_07093
03400 DNA repair and recombination proteins [BR:
pte03400
]
PTT_07093
Transcription machinery [BR:
pte03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PTT_07093
DNA repair and recombination proteins [BR:
pte03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PTT_07093
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
PH_TFIIH
Motif
Other DBs
NCBI-ProteinID:
EFQ95026
UniProt:
E3RGX4
LinkDB
All DBs
Position
Unknown
AA seq
658 aa
AA seq
DB search
MTDAAAQYKKQDGIVSVSADGKTVAWKSASGALPPLSIAIADIGNLQQTPATSAKASIKI
VVKEPSPQTGNHTFTFTSAAARNDQQNITSLLRKWIEASKQQVEASPAPVAPVTATAGAG
AGGDNGASAAMAMAQTVTAAGKDKEETYGDARLLADTALQMSLLNSSPALRQRFDRALLE
KPESVGVLQFSTQFWSTRVHMLRSHVTERSQTTGTYNVLSVIKSKSVNGTLMLNLTKEQI
ELLFRQHPIVQKAYNENVPQLSEGDFWERFFHSRLMKKLKGERIQDKDVLDPKLDKYLTY
DEATDSSQDLLASSIPNFINIEANENNHSQKQGNRPDFTMNPSNYEKAPILRVLNRMSEK
MMKDVPPSDTSRHGPVGLDEQTYKELRLRDLQLADDDNRVVLKVHDQSRFFSAGQSVHTS
TSAATYTKRTPAEALSTLQKDLHKFDQHNGHSSTVDLHSIIDINNESSSDEEGSAPKKTK
VGSKSSRSAASSQILAAVRKRHLHNDDLSSSKSISTSERAKELDVSEVILDDLTMTHNTT
VEFLHYFWAVFYSGDPDRANEIAKLIETLDKSLDRIKAVADRAETDRVARIEQARRENEL
SNQRERKKRRFDPEAIKGGKQAINQIVDPLLRAIDAARGQYQKALQEQIARNSANGTA
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgccgcggctcagtacaagaagcaggatggcattgtttctgtgtccgccgat
ggcaaaacagtggcctggaagtctgccagcggtgcgcttcctccgctgtcaatagccata
gcagacattggaaatctgcagcagacgcccgctacctcggccaaagcctccatcaaaatc
gtcgtaaaggagccatcaccgcaaaccggaaaccacacttttaccttcacctccgccgcc
gctcgcaatgatcagcaaaacataaccagtctgttgcgcaagtggatcgaggcttccaaa
cagcaagttgaagcttccccagcgcctgttgcgcctgttactgctactgccggtgccggg
gccgggggcgataatggcgcatcggctgccatggccatggcccagaccgtgacagcggct
ggcaaggacaaggaggagacgtacggggatgcaaggctactcgctgatactgcgcttcaa
atgtcactgctcaactcgagtccagcacttcgtcaacgcttcgatcgtgctctcttggag
aagcccgagtctgttggcgtcttgcaattctctacgcagttctggtcgactcgcgtgcat
atgttgaggtcgcatgtgacggagagatcgcagactactggcacatacaacgtcttgtcc
gtcatcaagtcaaagtcagtcaatggcactctgatgctaaacttgacaaaagagcaaatt
gagctccttttcaggcagcatcccatagttcaaaaagcctacaacgaaaatgttccccaa
ctgagcgaaggcgatttctgggagaggttcttccacagtcgcttaatgaaaaaactaaag
ggcgagcgcatccaagacaaggatgtgctcgacccgaagctcgacaaatatctgacttat
gatgaggcgacagatagttcccaggacctgctcgcttcttccattcctaatttcatcaat
attgaggcaaacgaaaacaaccacagtcagaaacagggcaaccgacccgacttcaccatg
aatccatctaattacgagaaagcacccatcctccgagttctgaaccgcatgagcgagaaa
atgatgaaggatgtcccaccttccgacacgagtcggcatggtcctgttgggctcgacgag
cagacgtacaaagagttacggttacgtgacttgcagcttgccgacgatgacaacagggtt
gtcctcaaagtacatgatcagagccgattcttctccgccggccagagcgtacacacgtcc
acgagtgctgcgacatatacgaagcgtacacctgccgaagcgctttctactctgcagaag
gatcttcacaagttcgaccagcacaatggccactcttcgacggttgatcttcattccata
atagacatcaacaatgaaagcagcagtgacgaggagggttctgctcccaaaaagacaaag
gttgggagcaaatcttctcgcagtgcagcgtcttcacagattctagctgccgttaggaaa
cggcatctgcacaatgacgacctctcatcctcaaagtccatatctacaagtgaacgagcc
aaggagctagatgtttccgaagtcatacttgacgatcttaccatgacccacaacaccacg
gtcgagtttctccattacttctgggcggtattttattcaggggacccagatcgtgccaat
gagattgcaaagctcattgagacactggacaagtcgctcgaccgcatcaaggctgtagcc
gatagggcagagacagacagggtggccagaatcgagcaagcacgcagagaaaacgagctg
tccaatcaacgagaaagaaagaaaagaagatttgatcctgaggccatcaagggtgggaaa
caagccattaaccagatcgtggatcctctgcttcgagcaattgatgcggcgcggggtcaa
taccaaaaagcactacaggaacagatagcgcgcaattcggcgaatggaactgcatga
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