Pyrenophora teres: PTT_07622
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Entry
PTT_07622 CDS
T01613
Name
(GenBank) hypothetical protein
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
pte
Pyrenophora teres
Pathway
pte03008
Ribosome biogenesis in eukaryotes
pte03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pte00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PTT_07622
09123 Folding, sorting and degradation
03018 RNA degradation
PTT_07622
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pte03021
]
PTT_07622
03019 Messenger RNA biogenesis [BR:
pte03019
]
PTT_07622
03009 Ribosome biogenesis [BR:
pte03009
]
PTT_07622
03016 Transfer RNA biogenesis [BR:
pte03016
]
PTT_07622
Transcription machinery [BR:
pte03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
PTT_07622
Messenger RNA biogenesis [BR:
pte03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
PTT_07622
Ribosome biogenesis [BR:
pte03009
]
Eukaryotic type
Pre-60S particles
RNases
PTT_07622
Transfer RNA biogenesis [BR:
pte03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
PTT_07622
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRN_M
XRN_N
zf-CCHC
Motif
Other DBs
NCBI-ProteinID:
EFQ94619
UniProt:
E3RI22
LinkDB
All DBs
Position
Unknown
AA seq
883 aa
AA seq
DB search
MGVPAMFRWLSQKYPKIVSTVQEELPKKVGDAVIPVDRTGPNPNGEEFDNLYLDMNGIVH
PCSHPEDKPAPKTEADMMMAIFEYTDRVVGMVRPRKLLYMAVDGVAPRAKMNQQRSRRFR
AAREAKEKDEERAEFQKILNSQKASRGEDIDTLEEVMEKTWDSNAITPGTPFMHLLAESL
QYWCAYKFTTDPSWKDMKVIISDASVPGEGEHKIMNFIRSQRAMPTHDPNTSHVIYGLDA
DLIMLSLATHEPHFKVLREDVFYDSGKDKVCTRCGRKGHIRTNCEFPEDEKKLTEEEAAE
EWATSEHQLKPYIWLHTNVLREYLAVEMDTPKRTFKYDLERSLDDWVFMCFFVGNDFLPH
LPSLEIRDQGIDLLISIWRDLAAEMDDYVTKDGYPDMRRVQQIMSALATREAGIFKKRKE
VSDRQAANRARREAQSNAHKRQRTDNDGVSAPGFKRAKETTDTYTSAGIVFFDPKDAQSK
EVRDVHKDIMHTRDSQSNKSAAARLKELLKAKADGTSLPEPEQTPDSEPALESASGTETP
VQLGKRKLDEVDDLDNGTPGRNTPVVPQSPTQAAQPPKKDDSPPEDTIMLWEDGYEERYY
EQKFHVAPNDIAFRNKVARQYAEGLCWVLAYYMQGCPSWTWYFPHHYAPFAADFVGLEDM
DPRKLFEKGVPFHPYEQLMGVLPAASNHAIPEPFRVLMEDPNSSIVDFYPEDFPIDLNGK
KFAWQGVAVLPFIDEKRLLEAMGTKYPELSDDERKRNEFGKETLMFSQESGLFDDVEKAL
YRKGQQKHKIDPAKSRALHGDIEPHDLFVMDSQLVPPFDADGTTDFEITQDRSMRVYYEM
PSVSSSRAHKSVLLEGVKLPKPALQPGEAESVRRSNERGGFRG
NT seq
2650 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtccccgccatgttccgctggctcagccagaaatacccaaagatcgtatccacc
gtccaagaagaattgcccaagaaagttggcgatgctgttatacccgtagatcgtaccgga
cccaaccccaatggcgaagagttcgacaacctatatctcgatatgaacggcattgtacac
ccttgttcgcatcctgaagacaagcctgcgcccaaaactgaggctgacatgatgatggcc
atctttgaatacactgaccgcgttgtcggcatggtccgccctcgcaagctgctctacatg
gccgttgacggtgttgcgccacgtgccaagatgaaccaacagcgatcgcgacgtttccgt
gccgctcgtgaggccaaagagaaggacgaggagcgtgcagagttccagaagatactcaac
tcacaaaaagcaagtcgaggcgaagacatcgacaccctcgaggaggtcatggagaaaact
tgggactcgaatgcaattacacctggtactcctttcatgcatcttcttgccgagagtctt
caatactggtgtgcttacaagttcacaaccgacccgtcgtggaaggacatgaaagtcatc
atctctgatgcatctgtgcctggtgaaggagaacacaagattatgaacttcattcgctcg
cagcgcgctatgcccacacatgatcccaacacttcgcacgtcatctacggcttggacgcc
gacttgatcatgttgagtcttgctacccatgagccccatttcaaagtccttagagaagat
gtcttctacgactcaggcaaggacaaggtctgcactcgttgcggccgcaagggacatatt
cgaacaaactgtgaattcccagaagacgagaagaagctcaccgaagaagaagctgccgaa
gagtgggccacctctgaacatcaactcaaaccatacatttggctgcacaccaacgtcctg
cgcgagtatctggctgtcgaaatggacacgcccaaacgcactttcaagtatgacttagaa
cgctctcttgatgactgggtctttatgtgtttctttgtcggtaacgatttcttgccacat
ttgcccagtcttgagattcgagaccaaggtatcgacttgttgatcagcatctggcgcgac
ctcgctgctgagatggatgactatgtgaccaaagacggctacccggatatgcgccgtgta
cagcaaatcatgtccgctcttgccaccagagaggctggtatcttcaagaagcgaaaggaa
gtttccgatcgccaggcagcaaatagggctcgacgtgaagcccagagcaatgcgcacaaa
cgtcaacgaacagacaacgacggcgtttcagcacctgggttcaagcgcgccaaagagacc
accgacacctacaccagtgcaggtatcgtgttcttcgatcccaaggatgcgcaatccaag
gaagtgcgtgatgtacacaaagacattatgcacactcgtgatagtcaatccaacaagagc
gcagcagcccgcctcaaggagctgttgaaggccaaggccgatggcacatctttgcctgag
cctgagcaaacaccagactctgagcctgctttagaatccgcgtctggtaccgaaacacca
gtccaacttggaaagcgcaagctagatgaggtggacgatctcgacaacggcacacctggc
cgcaataccccagtcgttccccaatctccaacccaggctgctcagcctccgaagaaggac
gatagtccgccagaagacaccattatgctttgggaggatggttatgaagagcgctactac
gagcaaaagtttcacgttgcacccaacgacattgctttccgcaacaaggtcgcacgtcag
tacgccgagggtctctgttgggtgttggcctactatatgcaaggctgcccctcatggacc
tggtacttccctcaccactacgctccttttgccgcagactttgttggtctcgaagacatg
gatccacgtaagctgttcgagaaaggtgtacccttccatccttatgagcaattgatggga
gttttgcccgccgcatcgaaccacgccatcccagagccattccgtgtactcatggaggac
cccaacagctccattgtcgacttctaccctgaagacttccccatcgatcttaacggcaaa
aagtttgcctggcagggtgttgccgttctgccgttcatcgacgaaaagcgactactagag
gccatggggactaagtacccagagctttccgacgatgagaggaagcgcaacgagtttgga
aaggagaccctcatgttttcacaagagagtggtctcttcgatgatgtggaaaaggccctg
taccgcaagggtcaacaaaagcacaagatcgaccctgcgaagagtcgtgcgctccatgga
gatattgagccgcatgacttgtttgtcatggacagtcaacttgtgccgcctttcgacgcc
gacggcacaacagattttgaaatcacccaagaccgttcaatgagagtatactacgaaatg
ccaagcgtcagctcaagccgcgctcacaagtccgtcttactcgaaggcgtcaagcttccg
aagccagccctccaacccggcgaggccgaatcggtgcgacgctccaacgaacgcggtggt
ttccgtggtc
DBGET
integrated database retrieval system
