Pyrenophora teres: PTT_07708
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Entry
PTT_07708 CDS
T01613
Name
(GenBank) hypothetical protein
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
pte
Pyrenophora teres
Pathway
pte03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pte00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
PTT_07708
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pte03400
]
PTT_07708
DNA repair and recombination proteins [BR:
pte03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
PTT_07708
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SLX1_C
GIY-YIG
FANCL_C
PHD
zf-HC5HC2H
PHD_NSD
zf-RING_16
zf-HC5HC2H_2
Prok-RING_1
zf-RING-like
Motif
Other DBs
NCBI-ProteinID:
EFQ94562
UniProt:
E3RI89
LinkDB
All DBs
Position
Unknown
AA seq
367 aa
AA seq
DB search
MTDGLKIDTRPIPAFYCCYLLRSKNRNAFYIGSTPSPARRLGQHNGSSTGGAKRTSMQGK
RPWEMTCIVTGFPSRFAALQFEWAWQNTHATRHIERHVREARKDELHKARKNASPVRRSR
PPMSLEARLKNLHHLLGVGSFSRWPLHLRFFAPDVFSQWEKHTSKMNTSLRKSITIRLTP
AELPKLAPDVLSEMRTHFIPEVIRAIPVAYEDLKPYVEKSMSTLGDGKTRNCAVCNKHVN
IDRSLVLICPNETCRSVAHMSCLSQTFLADEANKEAFIPIEGTCPSCHSPIKWSDMIKEL
SLRMRGEEELKTLFKAKRKKKKKKQADTTEDDTDEFPDIDELDAALDEDLDETWVENVNE
EDDRPPA
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgggctcaagatagacaccaggcccatccccgccttctactgctgctacctg
cttcgctcaaagaaccgcaacgccttctatattgggagcacacccagcccggcccgtcgt
ctgggtcaacacaatggttcgagcacgggtggcgcaaagcgaacgtcgatgcaggggaag
cggccttgggagatgacgtgcatcgtcaccggcttcccctccagatttgccgcactgcag
ttcgaatgggcgtggcagaacacgcacgcgacacgccatatcgaacgccatgtgcgcgag
gcgagaaaggacgagctgcacaaggccaggaagaatgcatcgcccgtcaggagatcaaga
ccaccaatgtcgctggaagcacgcctgaaaaacttgcatcacctcctgggcgtcggtagt
ttcagcaggtggccgctacacctccgattcttcgcccccgatgtgttttcgcagtgggag
aaacatacatctaaaatgaatacgagtctacggaagagcatcactatccggctgactccg
gccgagctgcccaagttggccccagatgtgttgagcgagatgcgaacacacttcataccc
gaagttatacgagcaattcccgtcgcttatgaggacctcaaaccatatgttgaaaagtca
atgagcaccctgggagacgggaagacgcggaattgtgctgtctgcaataagcatgtgaat
atcgatagatcgctcgtgctcatctgtcctaacgagacatgccgctcggtggcacacatg
tcttgcctgtcgcagacatttcttgccgacgaggctaacaaagaggcctttattcctata
gaaggaacatgtccaagctgccacagccccatcaagtggtccgacatgatcaaggagctc
agtctacggatgcgcggcgaggaagaactcaaaactctattcaaggcaaagcggaagaag
aagaagaagaagcaagccgatactacagaagacgacaccgatgaattcccagacattgac
gagctcgatgcagcgttagacgaggacctcgacgaaacctgggttgagaatgtaaacgaa
gaagacgatagacctcccgcataa
DBGET
integrated database retrieval system
