Pyrenophora teres: PTT_08146 Help Entry PTT_08146         CDS       T01613                                  Name (GenBank) hypothetical protein   KO K10706   ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] Organism pte  Pyrenophora teres Brite KEGG Orthology (KO) [BR:pte00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:pte03021]     PTT_08146 Enzymes [BR:pte01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      PTT_08146     5.6.2.5  RNA 5'-3' helicase      PTT_08146 Transcription machinery [BR:pte03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      PTT_08146 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  SEN1_N AAA_11 AAA_12 SEN1_barrel AAA_19 AAA_30 UvrD-helicase Viral_helicase1 Annexin DEAD AAA_22 nSTAND3 ResIII AAA_29 EntA_Immun Motif Other DBs NCBI-ProteinID:  EFQ94249 UniProt:  E3RJ54 LinkDB All DBs Position Unknown AA seq 1967 aa AA seqDB search MANHSVPLSELRELPEDQHLFCPRIGEDGSVYYDEDVAAYPLETDPTELAHRKLKLQEAE DRKWAALKATEILAFDDDDAAPHKEWLASRLNQLMQSCDVCVRVFHQSRAEWQSRLLDTY DEENVRIFMERMDTQCLGRIQKGLDEANEILGKAEPKSRSVRLLPNECTYGFFEALSCDA LIRNEELLQRHFDAPFDMVQTKKRLKVQTYLPAMTRFLFSRVERRHKWATESWSTFKRNL LKSEWDWAVRDYITSVMMKVQMYGLDKDLVPLFWGGSRLIVAKMDRELITDSLRALDGDF YRLMLDHLSLPSEGFLDLIATMKQLLETSPIDYWDGMNAVTPSIATVVEQVFNSPVFNQL LLAAADENEQSIANLHAAFSWIPPFLDSIKLSNLGPAIRPFAQALLGRFQSDHYPATSRA YCYREGLKVLDYAFRKMGEGKSTDKFVGQPVVNGMLDMLSTFIQSLVMNLNHSKSSKNSQ DMQLALSVIEHAFKLEAHSLIIERNLISAKQPSPTETPPSSPIWKTVLRAIGPGSLELAT HLLIAGRTLIGLEPLQMKSGVDKVPATVRHFNNRFELLSQSITDVVEKLSEYDPSLLRAL FGQRPAASAIISLMFSSVEYTRLSARELLKVISGEEERRGALQHMLRAHYRNMVLGISDS IRQVRLKRAFAPVPDMIRTCSDIIDIICNSQDGILRSQEYESGDAAATMCLWENLWDSLT MIFATTEGWSNLGFYDKRMMMDFCRDTMQFADMLFDQYSLFATVLQPPTPDEDGSTSKTM LLKELLARPANAMEGLAKWLRLRDEFLSSKSVALISKLLVRLRRVSIDIDADALSYMERV LSGDVRAKLSKIQQAELQQALEEHLGRTLVKEEEPMKPKQASISKWMSPGVTPTPGHAKA NLMASMTAGAAKFQERREQTKTSATKAAQQKAADDVKSAQQAEFKRKRLQEKERTERERA AIVAKAKAARVLSSHTAEAGSGLEGLGVLGKEQAAKGEGLMHSSDESSNEEGDIDEDMFG SKGTKIKTGPKTNMINQLSFQMPTKKRRRVQSGKSMLARIAPDLSGLHVTILGWNYFYDG DFPPKTSKGDYSGVISTFHTPVDYQRTFERLLILEAWQSFIKMRDEPLAKPYEIQISSQA RVDQFSEVGTTLKYSVSKEMPFFEGDIILLSQSKPSADEPACLARVSNVKRTKAHFEITY RLMPGGQLQNVFHKNNTLLATKIDSITSLEREFAALKGLQYYDLCDEIIKAKPSPLLTYK DSQIQPLISNYNVNMAQGKAIKSAIDNDGFTLIQGPPGSGKTKTITAIVGAILSGSFRNR GTNIAVPGQPQSDAAPKKILVCAPSNAAVDELCMRFRQGIKTLNGEERQISIVRLGRSEA VKASIQDLTLDELVDKRLGAEKRSDADSNGNEQEARQKVFSEHQETSKQLREAYDLRNKG EVKGEAAAKLDNDISALYRKKKELSGQIDAIKDNQAATGRKADARRDKAIAAILNDAHVV CSTLSGSGHNMFRTIEVEFDTVIVDEAAQCVEMSALIPLKYGCAKCILVGDPKQLPPTIF SKEAARFRYAQSLFMRMQQNHPNDVHLLDTQYRMHPEISLFPSQTFYDGKLLDGGDMASL RKQPWHQSSLLGPYRFFDVKGQQQKAPSGKSLMNIAEINVALQLYNRLTSDYPDYNFKGK IGIITPYKSQLQEIKQRFMKAYGQTIIEDIDFNTTDAFQGRESEIIIFSCVRANGGIGFL DDVRRMNVGLTRAKSSLWVLGNSASLQSGEFWNKLIVNAQARKRFTDGDISRMLNQHSSK FPAPKEGYVQANRPMPDVKPEVQSEPMSRSASNQPNTSMKEVKKEEIKIKTEMTLVHHEK RKFEQQSNGVDDIKRESSDVEMEDAASESAPNTTNGGSGRSTPAAQADATRKGSTPGLEG SDGTTGAPAAITGDVIGGMSMAKGPKIRRRPRPPQDPFIKNKKPKSG NT seq 5904 nt NT seq  +upstreamnt  +downstreamnt atggctaatcattccgttcccctcagcgagctccgagagctgcccgaagaccaacatctg ttctgtcctcgcatcggcgaagatggatcggtatactacgacgaggatgtggccgcatat ccgctcgaaaccgaccccactgaactcgcccaccgtaagctgaagctgcaagaagccgaa gaccgaaaatgggcagcgctcaaggcgacggagatactggcattcgacgacgacgatgca gcaccacacaaggaatggctggccagtcggctcaaccaactgatgcagagctgcgacgtc tgcgtaagagtctttcaccagtcccgcgcagaatggcaatcccgactccttgacacgtac gacgaggaaaatgttcgcatatttatggaaagaatggatacgcaatgtctgggtcgcata cagaagggcttggacgaggccaatgagatactgggcaaagcggaacccaagtcgcgatca gtgcgcctgctaccgaacgaatgtacctacggcttcttcgaggcactgagctgtgacgcc ctgatacggaacgaagaactcctccagagacactttgatgcacccttcgacatggttcag acaaaaaagcgattgaaggtgcagacatatctccctgccatgacgcgctttctcttcagc agggtcgagaggcgtcacaagtgggcaactgagtcctggtctaccttcaagcgaaacttg ctcaagtccgaatgggattgggcggtgcgggactacattacaagtgttatgatgaaggtg caaatgtacggcttggacaaagaccttgtgcctcttttctggggtggctcgcggcttata gtcgcaaagatggacagggagcttattacagactctctaagggctctcgatggagatttc tatcgtttgatgctcgatcacctttcactaccgtcagaaggtttccttgatctgattgca accatgaagcaactactggaaacgtctccaatcgactactgggatggcatgaatgctgtt acaccgtccattgcaacagtggtggagcaagtgttcaacagccctgttttcaaccagtta cttctcgccgcagccgacgagaatgagcagagtattgccaacctacatgctgccttcagc tggataccgccttttcttgactctatcaaattgtcaaaccttggaccggcaatccgacct tttgcacaagcgcttcttggccgttttcagtctgaccattacccagcaacgtctcgagcg tattgctacagggaaggcctcaaggttctggactacgccttccgtaagatgggggaaggc aaatccacggacaagtttgtcggtcaacctgttgtcaatggtatgctagatatgctgtca accttcatacagtccctcgtcatgaacctgaaccattccaagagtagcaaaaacagtcag gatatgcaattagcactttcagtaattgagcatgctttcaagctcgaggcgcactctctg atcatcgagaggaatctgatctctgccaagcaaccgtcgcccacagagacaccaccttct agtcctatatggaagacagtcctgcgagccataggtcctggaagcttggaacttgcgaca catctgctcattgccggtagaactttgatcggccttgaaccgctgcagatgaagtctggt gtcgacaaggtgcctgccacagtacggcatttcaacaatcgctttgagctgttatctcag tccatcaccgatgttgtggagaagttgtcggaatatgatccctctctcctgcgagcacta ttcggacaacgacctgcagctagcgccatcatctctctgatgttctcgtctgtagagtat acacgcctctccgcacgcgaactcttgaaagtcataagcggagaagaagagcgccgaggt gctttgcaacacatgttgcgtgcccattacaggaacatggttctcggtatttcagattcg attcgccaggttagattaaagcgggcgttcgctccagtcccagacatgatcagaacttgc agcgacatcattgacatcatctgcaactctcaggacggcatactgcggagccaagagtat gaatctggagacgccgcagcgacgatgtgtctctgggagaacctctgggattcacttacc atgatctttgcaacaaccgaagggtggagtaacctgggcttctacgacaaacgcatgatg atggacttctgtcgagacactatgcaatttgctgatatgctattcgaccagtacagcttg ttcgcgacggtcctacagccacctacccccgacgaagacggaagcacatcaaagacaatg ttgctcaaagagctgttggcccggcctgccaatgccatggagggcctggctaagtggctt cgtcttcgtgacgagttcctgtccagcaaatctgtcgctctaattagcaagctgcttgtc cgcctacgtcgcgtgtctattgacatcgatgccgacgcgctctcatacatggaaagagtt ctatcaggagacgttcgggcaaagctcagcaagatacaacaagccgagctgcaacaagcc cttgaggagcatcttggccgcacgctcgtcaaggaagaggagcccatgaaaccaaaacag gcctctataagcaaatggatgtctcccggtgtgacgccaacaccaggacatgccaaagcc aacttgatggctagcatgaccgcaggagctgccaaattccaagagcggcgagagcagacg aagacctcagcaacaaaggctgcgcagcaaaaggctgcagacgatgtaaagagcgcgcag caagctgaattcaagcgcaagaggttacaagagaaagagaggactgagagagaaagggcc gctatagtcgccaaggccaaggcagctagagtcctttcttcgcacactgcggaagcaggc tctgggctcgaaggcttaggtgtcttgggcaaagaacaggctgccaagggagaaggcctg atgcattcttccgatgaatcgtcgaacgaagaaggtgacattgacgaagatatgttcggg tccaagggcaccaagatcaagactggaccaaagacgaacatgatcaatcaactcagtttc cagatgccgaccaagaagagacgacgggtgcaatccggcaagagcatgctcgctcgtatt gcgcctgatctgagtggcctacatgtcacgatacttggttggaactatttttacgacggt gacttcccgccgaagactagcaagggggattattctggtgttataagtaccttccacact cctgtcgattaccaacgtacattcgagcgccttctgatattggaggcatggcaaagcttt atcaaaatgcgcgatgaacctctggcaaaaccatacgagatacaaatctcctcacaagcg agggtcgatcagttttcggaagtaggcactacgctgaaatacagcgtgagcaaggagatg cccttttttgaaggagacattatcctcttgtcacaatctaaaccctccgcggacgagccg gcatgtctcgccagggtgtccaatgtcaagagaacaaaagcgcacttcgaaattacttac cgccttatgccaggaggccagcttcagaacgtgttccacaaaaataacacattgctcgca acaaaaatcgactcaattacatctctcgagcgcgagtttgctgcgctcaaaggacttcag tactacgatctgtgcgacgagatcatcaaggcgaaaccttcaccacttttgacttacaag gatagtcaaatccagccactcatctccaactacaacgtgaacatggcgcaaggaaaagcc atcaagtcagccattgacaatgatggttttaccttgatccaaggtcctcctggttccgga aagactaagacaatcacggctatcgttggagcaatccttagtggcagctttcgtaatcgt ggcactaacatcgccgtgcctggccaaccgcaatcagacgccgccccgaagaaaatacta gtctgtgcaccaagtaacgcagcagttgatgagttatgtatgcgcttcagacaaggcatc aagactctcaatggcgaagaacgtcagatcagcatcgtacgtctgggtcgtagcgaggct gtcaaagccagcatacaggacctgacgctagacgagcttgttgataagcgtttgggcgct gaaaagcgttcggatgcagattcgaacggtaatgagcaagaagcgagacagaaggtgttc tcagagcaccaggaaacatccaaacagctgagagaagcttacgatctacgaaacaagggt gaagtgaaaggagaagccgcagctaagcttgacaatgacatcagtgccctgtatagaaag aaaaaagagctctcaggtcagatcgacgctatcaaagacaaccaagcggcaaccggccgt aaagcagatgcgcggcgagacaaggcgattgccgccatcttgaatgacgcacacgtggtt tgttcaacactcagtgggtccgggcacaacatgtttcggactatcgaagtcgaattcgac acggtcattgtcgacgaagctgctcaatgtgttgagatgagcgctctcattcctctcaaa tacggatgcgccaagtgtatccttgttggagatccgaagcaattacctccaacaatcttc tcaaaggaagcagcccgtttccgatacgcacagagcttgttcatgcgcatgcagcaaaac catccaaatgacgtgcacctacttgatacgcaatatcgtatgcacccggaaatcagcctg tttcccagccagacattctacgatggcaagctcttggacggtggcgacatggccagcttg cgtaagcaaccatggcaccagagttcgctattgggaccttatcgcttcttcgatgtcaaa ggacagcaacaaaaggcaccttcgggcaaatcacttatgaacattgccgagattaatgtc gcattgcagttgtataaccgcctcacgtctgactaccccgattacaacttcaagggtaaa attggcatcatcacaccatacaagagtcagcttcaggaaataaagcagcgtttcatgaaa gcctatgggcaaaccatcatcgaggacattgacttcaacacgacagatgctttccaaggc cgtgaaagcgaaatcataatcttctcgtgtgtacgagctaacggtggcattggcttcctt gacgatgttcgccgtatgaacgtcggtcttacgcgagcaaaatcgtcgctgtgggtgttg ggtaactcggcgtcacttcaatcaggagagttctggaacaagctgattgtgaacgcccaa gcgaggaagcgatttaccgatggagacatctcaagaatgctcaatcagcattcgagcaag ttcccagcaccaaaggagggttatgtgcaggccaaccgaccaatgccagacgtcaagcca gaagtgcaatcagagcctatgagtaggtcagcgagtaaccagcccaacacctccatgaag gaagttaagaaggaagagatcaagatcaagacggagatgacgcttgtacatcacgagaag cgcaagtttgagcaacagagcaacggcgtggacgacatcaagcgtgagagcagtgatgtt gagatggaagacgcggcgtccgagtctgcgcccaacacgacgaacggaggcagtggccgg tcaacaccagctgctcaggccgatgcgacgcgaaaaggctccactcctggcttagaggga agtgatggaacgactggggcgcctgctgctatcacgggagatgtcatcggaggcatgtcc atggcaaagggacccaagattcgtaggcgaccccgcccaccacaggatccgtttatcaaa aacaagaagccgaagagcggctaa

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