Pyrenophora teres: PTT_08680
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Entry
PTT_08680 CDS
T01613
Name
(GenBank) hypothetical protein
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
pte
Pyrenophora teres
Brite
KEGG Orthology (KO) [BR:
pte00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pte03009
]
PTT_08680
Enzymes [BR:
pte01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PTT_08680
Ribosome biogenesis [BR:
pte03009
]
Eukaryotic type
90S particles
Helicases
PTT_08680
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
HA2_C
HA2_N
DEAD
OB_NTP_bind
AAA_22
AAA_19
nSTAND3
AAA_16
T2SSE
PhoH
Motif
Other DBs
NCBI-ProteinID:
EFQ93814
UniProt:
E3RKC4
LinkDB
All DBs
Position
Unknown
AA seq
1240 aa
AA seq
DB search
MPKFVPRQRKHKVLARRKPSNDGATIDANAAEILPQEEQERAQKKAALKDELTRESQGKM
SSKKKKRLDKYIDTKLKKEENLELLKKLASQKVDTSLFQSSKKLGRGADTKREALRRALA
ESRAGIDVAKNEGLLLEKHEVREIEDDSSDEESRPTTNTVLKATPAKTFSKPAPNETLRE
PSPSEPETHTSATSLTAPQRTNGLFGTGLKRPLEVDESGKPVIQVRKRRKGQSKKPVVVE
EEVAWEGFSSSEEKSEQEDIEESEHSSAGSEDAGTESEEEDMSETESGSSEEDSEEDSEK
DSEDDSDEESDTSPDEENKIAKKERTSAFKAWATQQRNEQVGFTPTNQLSYAPTPASFKP
RAPEQDPLPPELETNTATDATRKAFSVVVERSPEIQESRMQLPIVAEEQKIMEAIHNHDV
VVVWGATGSGKTTQVPQFLLESGYGAADGPTPGMIGVTQPRRVAAVSMAKRVGDELGDQA
SKVAYQIRFDTSTNAKTAVKFMTDGVLLREITQDFVLTKYSAIVIDEAHERSVNTDILIG
MLSRIVDLRAQMAREDPKNKPLKLIIMSATLRISDFTENKRLFRGEPPPLIKAEGRQYTV
VNHFARRTQRDYVEEMYRKVCRGHRKLPKGGMLVFLTGQNEISQLAKQLKQAFPSTQGKD
IKAGKVVISPTETPLEVEDIELGVPGQNKSYEDDDGSDSEGSVIMGLDDEDDKEFEIEDE
KPEETVMNVHVLSLYSQLPTNQQLRVFDPPPDGSRLIVLATNVAETSLTIPGIRYVFDCG
RAKEKKYDLVTGVQSFEVGWISKASANQRAGRAGRTGPGHCYRLYSSAVFERDFEEYAAP
EISRTPLEGVVLQLKSMGAPVVSFPFPTPPDRESLQKAENLLSYLGALSVDGKVTKLGHE
LSLYPLNPRFARMVAMGVAQNLTAETIALVAALSVPELIIPENKLGLREPVKDPEAIRTE
QDNMEAEERSRMRKAYNAAQAKMSINAKQSDCIKLSNAICAYAYEPNSHGFCEDMFLNAK
AMNEASQLRHQLTNIVRAHRPTAIGGYQAKLPAPSERSINLLTQICAAGFIDQIAMRADL
APIPPDLPRKPKTAIDVPYVTLFSSQSERSDDPHAQYVYLHPSSILARTPPAKMPGYIIY
SHLQRAATSTINGSRTPKTRMHPLTPVTRPQIINIALNTPLLQASKPKGKIVELSKDKRE
CEVEMSLMGEKGSQGWGLGIRKVVQRKESDGRWVVERILG
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaattcgtgccgcgacaacgaaagcacaaggtcctcgcccggcggaaaccttcc
aatgatggcgcgaccatcgacgcaaacgccgcagaaattttgccccaggaagagcaggag
cgcgcacaaaaaaaagccgcgctcaaggatgagctcacacgggaatcccaaggcaagatg
agcagcaagaagaagaagcgacttgataaatatattgatacaaaactcaagaaggaggaa
aatcttgagctactgaaaaagcttgcttctcaaaaggttgacaccagcttatttcagagc
tccaagaaactaggacgtggagcggatactaagagggaggcattgaggcgggcgcttgct
gaaagcagagccggtattgacgtcgccaagaatgaaggattattactggagaagcacgaa
gtcagggagattgaggacgacagctcagacgaagagagccggccaacgacaaacactgtt
ctaaaagcaactccagcgaaaacattctcgaaaccggcgcccaatgaaaccttgcgagaa
ccatcaccctccgaaccagagacacacacctccgctacatcgctcaccgctccacaacgg
acaaacgggctatttggaactggattgaaaaggcctcttgaggtggacgaatcaggaaaa
cccgtcatacaagtacgcaaacgccgaaaaggccaaagcaaaaagcccgttgtggtcgag
gaagaagtagcctgggagggattcagctcgagtgaagaaaagagcgagcaggaagacata
gaagaatctgagcactctagcgcaggatcggaagacgctggtaccgagtccgaagaggag
gacatgtcagagacagagtcaggttcgtcagaagaagactcagaggaagactcggagaaa
gactcggaagatgatagcgacgaggagagcgacacaagccccgacgaagaaaacaagatc
gcaaagaaggaaaggacgtcggcattcaaagcctgggctacacagcaaagaaatgagcaa
gtaggcttcactccaaccaaccaactctcatatgcaccgacgcccgctagtttcaaacct
cgagctcccgagcaagatcctctgccccccgaacttgaaacgaacaccgcgaccgatgcg
acacggaaagctttcagtgtagtcgtggaacgatcacccgaaatacaggagtcaaggatg
cagcttcccatcgtggcggaagaacaaaagatcatggaggctatacacaaccatgatgta
gtagtggtttggggtgccactggtagcggtaaaaccacacaagtgccgcagttcctcctg
gagtctgggtatggagcagccgatggcccaacacccggcatgattggcgttacgcaaccg
cggcgagtagccgcggtgagtatggcaaaacgtgttggcgacgaactcggtgaccaggcc
tcgaaagtggcgtaccaaatccgtttcgacacctctacaaatgccaagactgccgtcaag
ttcatgactgatggtgtgctgctacgggagattactcaagatttcgttttgacaaagtac
tctgcaatcgtcattgatgaggctcacgagcgcagtgtaaacacggacattttgattggt
atgctcagcaggattgtggatctgcgagctcagatggcgcgggaagacccgaagaacaaa
cctcttaaacttatcatcatgtctgccacactacgcatatcggactttacagagaacaag
cgcttgttcaggggtgaaccaccgccacttatcaaggcagaaggccgccagtacaccgtt
gtcaaccatttcgcacgtcgcacccagcgagattatgtcgaagagatgtaccgcaaggta
tgcaggggacatcgcaagctacccaaaggtggaatgctggtcttcctcaccggtcagaac
gagatctcccagctagccaagcaattaaagcaagctttcccttctacacaaggcaaagac
atcaaggctggcaaggtggtgatatccccaacagagacgccattggaagtagaggacatc
gaactgggtgtgccaggtcagaataaatcctacgaggacgacgacgggtcggactctgaa
ggctctgtgattatggggctcgatgacgaggacgacaaggagtttgagattgaagatgaa
aagcccgaagagactgttatgaacgtacacgtcctatctctctattcacaattgccgacg
aatcagcaattgcgtgtgttcgacccacccccggatggctcacgacttattgtgctcgct
acgaatgttgccgagacaagtttgacaataccggggatccgctacgtgtttgactgtgga
agagcaaaggaaaagaagtatgatcttgttactggtgtacaaagctttgaggtcggatgg
atcagcaaagccagtgctaaccagcgagctggtcgtgcaggtcgtaccggccctggccac
tgctatcgtctatactcatctgcagtgtttgagcgagactttgaagaatatgccgcccct
gagatctctagaacgccactagagggtgtggttctacagttgaagagtatgggagcgcca
gttgtcagctttcctttccctacgccacccgaccgtgaaagcttgcaaaaagccgagaat
ttgctctcctatctgggcgcattgtctgtggacggaaaagtgacaaagcttggtcatgag
ctttcgttatatcctcttaacccgcgattcgcccgtatggtcgcaatgggcgttgcgcaa
aaccttacagccgaaaccatcgcgcttgtagccgccttgtcggtgccggaacttattata
ccggagaacaaactcgggttgcgagagccagtcaaggaccctgaggctatccggacagaa
caggataatatggaagctgaagagcgctcacgaatgcggaaagcttacaacgccgcacaa
gcaaagatgagcattaatgcgaagcagagcgattgcatcaagcttagcaacgctatatgt
gcttacgcctacgaacccaactcgcacggtttctgcgaagacatgtttctcaatgcaaaa
gctatgaatgaagctagccagctccggcatcagctcacaaatatcgtccgcgcacaccgg
ccgacagctatcggaggataccaggccaagctccccgcgccttcagagcgaagcatcaac
ctcctcacccaaatttgcgcagcaggatttatcgaccagatcgccatgcgcgcagacctc
gcccccataccgcccgaccttcccaggaaaccaaagaccgccatcgatgttccttacgtg
acattgttctcctcccaatcagagcgctcagatgacccacatgcgcaatatgtctatcta
cacccttcatccatactcgctcgtacaccaccagcaaagatgccgggatatatcatctac
tctcaccttcagcgcgcagcaacatccaccatcaatggtagcaggacaccgaaaacgcgc
atgcacccgttgacgcccgtcacgagaccacaaatcatcaatatcgcgttgaacacgccg
ttactgcaggcttctaaacccaaaggtaagattgtggagttgtcaaaggacaagcgtgag
tgtgaggtagagatgagtctcatgggtgaaaagggaagtcaagggtggggtctgggtatt
agaaaggtggttcagaggaaggagagcgatggccggtgggttgttgagaggatacttggc
tga
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