Pyrenophora teres: PTT_08699
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Entry
PTT_08699 CDS
T01613
Name
(GenBank) hypothetical protein
KO
K12599
antiviral helicase SKI2 [EC:
5.6.2.6
]
Organism
pte
Pyrenophora teres
Pathway
pte03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pte00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PTT_08699
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pte03019
]
PTT_08699
Enzymes [BR:
pte01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PTT_08699
Messenger RNA biogenesis [BR:
pte03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
PTT_08699
mRNA degradation factors
3'-5' decay
Ski complex
PTT_08699
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
Ski2_N
DEAD
MTR4-like_stalk
MTR4_beta-barrel
Helicase_C
ResIII
DEXQc_Suv3
Ski2_beta-barrel
Motif
Other DBs
NCBI-ProteinID:
EFQ93791
UniProt:
E3RKE2
LinkDB
All DBs
Position
Unknown
AA seq
1298 aa
AA seq
DB search
MEVLSGELEKLRLSSSRFNENTDWIDSLAAEQRPPKRQRKTKDVIKKELEQDFLTPSHSF
NAHWLNQLQHRWDAPTNYRSLFQIAPTQTRTIIRFTREGLEGRVTGYKEVTVPANSATAK
NSTSLLRKPANRAEFVRGAAGFFPFAPGGLDGVEAIAAIEDEAIQQQENARGKKTGGLDR
VINFSAEGGLLEIPPGFTRGLDFQKRPAMDVKLAKEVEDALGEAPAAAKDTESDEAEANN
TGSNGAEKLDEDQTVGEEEIDALLPVEFPALAPHGPLAMGAGRKGGREWAHMVDIDRDIT
NFRELVPEMAREYPFELDTFQKEAVYHLEHGDSVFVAAHTSAGKTVVAEYAIALAAKHMT
KAIYTSPIKALSNQKFRDFRQTFDDVGILTGDVQIRPEASCLIMTTEILRSMLYRGADLI
RDVEFVIFDEVHYVNDLERGVVWEEVIIMLPEHVTLILLSATVPNTYEFASWVGRTKKKD
IYVISTPKRPIPLEHYLWAGKGMHKIVTADKKFIDNGWKDANDILSGKDKVKAPPANDAQ
AGRGGGGRGGPTARGGQNQRGRGQQGGGRGGAPRGGGAPAARGRGNIARTGRGGGRTTAA
QDRNIWVHLIQHLRNKDLLPACIFVFSKKRCEENAEALSNIDYCNAAEKSAIHMTIEKSL
ARLSREDRELPQIKRLRELLSRGIAVHHGGMLPIVKEVVEILFAKTLVKVLFATETFAMG
LNLPTRTVVFSGFRKHDGREFRDLLPGEYTQMAGRAGRRGLDTVGTVIICAPGADEAPPA
ARLRQMMLGEPTKLRSQFRLTYNMMLNLLRVEALKIEEMIKRSFSENATQALLPEHQGKV
KVSEAELEKIKREPCDICDVDLEACHQSCEDFKRLTNETHLSLLINPIGRLVFCKNRLIV
YKKDNKRTAGMLMQNGTSKGNEPTVKVLEIAQHQDRKPDDLLPYVGALAHFFRKLPNDPN
DLILKTAFVPLNDIECFTKTIIDVDESVQNLSRKKDTLKLAQAQFLPLCGSWDYEDWDEY
DYSRIKSLKFRELQDVRMREGQNAVSKECLKCPNFLKHFAMEHDQWLIKENILALRQLMS
DQNLQLLPDYEQRIHVLKDLGFIDEGSRVELKGKVACEIHSADELVLTELVLENVLAEYE
PEEIVALLSAFVFKEKTDVEPTLTANLERGVAKIVEISEKVNQIQTLHQVILSADDSNDF
VSKPRFGMVEVVYEWARGMSFNRITDLTDVMEGTIVRVITRLDETCRERYLQLCKLVPVN
DPFQAADWRLGKREQADLGARQPDSVGIFLKLQEKVGF
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcctgtcaggagaactcgagaagctgcgtttgagcagcagcaggttcaacgaa
aacacagactggatagattcactagcagccgagcaacgaccccctaagcgacagcggaaa
accaaagatgtcatcaagaaagagctcgaacaggacttcttgacgccttcgcactcattc
aacgcccattggctcaaccagctccagcatcgatgggatgcgccaaccaactatcgcagt
ctcttccaaatagccccaacacaaacccgcactatcattcgtttcacgcgcgagggtcta
gaaggtcgcgtcaccggttacaaagaggtcactgtacctgcaaattcagcaacggccaag
aattctacttccctcctcaggaagcctgccaacagggccgaattcgtgcgtggtgcagcc
ggctttttcccgttcgcccctggtggtttggatggagtggaagcaatcgcggccattgaa
gatgaagcaatccaacagcaagagaacgcccgaggaaagaaaacggggggtctcgatcga
gtcatcaacttcagcgccgaaggcggcttactggaaatcccgcctgggttcacacggggt
ctagactttcagaaaaggccagccatggatgtcaagttggccaaagaagtggaggatgct
ctaggcgaggcccctgcagctgccaaggacaccgagtcagacgaagcggaggctaacaac
accggctcgaacggtgccgaaaaacttgatgaagatcagactgttggggaagaagaaatt
gatgcactattgccagtggagttccctgctttagctcctcatgggccccttgccatggga
gcgggaaggaaaggggggcgcgaatgggcacatatggttgacatcgaccgagacattaca
aatttccgagagcttgtcccagaaatggcgcgagagtatccttttgagcttgacacattc
cagaaagaggcggtgtaccatctcgagcatggtgattcagtgttcgtagccgcacatacg
tccgccggcaagaccgtcgtcgcagagtatgccatcgcacttgctgcaaagcacatgaca
aaagcgatttacacgtctcccatcaaagcactcagtaatcaaaaattccgcgattttcgt
cagacatttgatgatgttggcatcctcaccggagatgtgcagataaggcccgaagctagt
tgtctcatcatgaccactgagattcttcgaagcatgttgtatcgtggagcggacttgatc
agagatgtcgaattcgtcatcttcgatgaggtgcactatgtcaacgatctagagcgaggt
gtagtttgggaagaggtcattattatgctgccagagcatgtaaccctcatcctactgtcc
gccactgttcccaacacctacgagtttgcgtcatgggtaggtcggaccaagaagaaggac
atttacgtcatctccacaccgaaacgtccaatcccccttgaacactatctctgggccggg
aaaggcatgcataagattgtgacagcagacaagaagttcatcgacaatggttggaaggac
gcgaatgacattctgtctggcaaggataaagtcaaagcaccgcctgctaatgacgcgcag
gccggtagaggcggagggggacgcggaggaccgactgcaagaggaggacagaatcagcgt
ggacgaggtcagcaaggtggtggccgaggaggagcacctcgcggtggaggagcaccagcc
gctagggggcgcggcaacattgccagaaccggccgtggcggcggccgcaccacagccgca
caggatcgtaacatatgggtccacctcattcagcatctccgaaacaaggacctcctgcct
gcctgcatatttgtcttctctaagaaacggtgcgaggaaaacgccgaagcactgtcgaat
attgactactgcaacgctgctgaaaagagcgcgatccatatgacgattgagaagtccctt
gctagactgagccgcgaggaccgcgagcttccccagatcaagcgactacgagagctactc
agtcgaggcatcgctgtacaccacggcggtatgttgccaattgtcaaggaggttgttgaa
atcctctttgcgaaaacattggtcaaggttctgttcgccacagaaaccttcgccatgggt
ctcaatcttccgactagaacagtagtcttctccggtttccgaaagcacgatgggcgtgag
tttcgcgatctactccctggtgagtacacgcaaatggctggacgtgctggaagacgaggt
ctagacactgttggcaccgtgatcatctgcgctcctggagccgacgaggcacccccagcg
gcgagacttcgacagatgatgctcggtgagcctacaaagcttaggtcacagttccgtctc
acgtacaacatgatgttgaacctcctacgtgtcgaggcgctcaagattgaggaaatgatc
aagcggagcttcagtgagaacgccacacaggcattattgcctgaacatcaaggcaaagtc
aaggtttcagaagcagagctcgagaagatcaagcgtgagccttgcgatatctgcgatgtt
gatctggaagcctgccatcaatcgtgcgaagacttcaagcgattgactaatgaaacgcat
ctgagtcttcttatcaaccccataggacgactggtgttttgcaaaaaccggctgattgtg
tataagaaagacaacaaacgaaccgcaggcatgttgatgcagaacggcaccagcaaaggt
aatgagcccactgtcaaggtgttggagattgcgcagcatcaggaccgtaagcctgatgac
ctccttccatatgtcggtgccttggcacatttcttccgcaagctgccaaatgacccaaac
gatctcatactcaagactgcttttgtcccactaaacgacattgaatgctttaccaagaca
attatcgacgtagacgagtctgtccagaacttaagccgcaagaaggatacgctgaagttg
gctcaagcccaattcctacccctgtgtggatcgtgggactacgaagactgggatgagtat
gattatagccggatcaagagtcttaagttccgagagttgcaggatgtgcgcatgcgggaa
gggcagaatgcggttagcaaagagtgcttgaagtgtccaaatttcttgaaacattttgcc
atggagcacgaccaatggctcatcaaggaaaatattcttgctctccgacagctcatgtca
gaccaaaatctccagctactccctgactacgagcaacgcattcacgttctcaaggatcta
ggtttcatcgacgagggctcccgtgtggagttgaagggcaaggtagcatgcgagatccac
tctgccgatgagctggtccttaccgaacttgttttagaaaacgtcctcgccgagtatgaa
ccggaagaaattgtcgctctgctttccgcattcgtcttcaaagagaagacagatgtcgag
cctactctaaccgccaacctggaacgcggtgtagccaagattgtcgagatatcagagaag
gtcaatcaaattcagacgctgcatcaagttatcctgtctgcagacgattcaaacgacttt
gtcagcaagcctcgtttcggcatggttgaggttgtgtacgaatgggcgcggggaatgtca
ttcaaccgcataaccgacttgacagacgtcatggaaggcaccatcgtccgcgtcatcaca
cgtctggacgaaacatgccgagagcgatatctgcaactgtgcaagcttgtacctgtaaac
gacccatttcaggcagcggactggcgtttgggaaaacgagaacaagccgacttgggtgcc
cggcaacccgacagcgtggggattttcctgaagttgcaggaaaaggtggggttttaa
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integrated database retrieval system
