Pyrenophora teres: PTT_09856
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Entry
PTT_09856 CDS
T01613
Name
(GenBank) hypothetical protein
KO
K07573
exosome complex component CSL4
Organism
pte
Pyrenophora teres
Pathway
pte03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pte00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PTT_09856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pte03019
]
PTT_09856
Messenger RNA biogenesis [BR:
pte03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
PTT_09856
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
PTT_09856
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
Motif
Other DBs
NCBI-ProteinID:
EFQ92934
UniProt:
E3RMW1
LinkDB
All DBs
Position
Unknown
AA seq
211 aa
AA seq
DB search
MTLPQIALPGQFLAKTSDYLPGPGTHIHESQIYASIAGPVISTPSSSTTNSTSKSSNLTP
LLSITRPPSSTDPGILGPNSGAGIPLLPTVSSTVLVRITRLGPRFASCEILVIDNLVCRE
AFVAQIRREDIRATEKDKIKIEESFRVGDLVRGTVISLGDSGNYYVATDANEYGVVLARS
EEGRIMHPVSWKEFRDPVSGKAELRKAAKPF
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgacgctcccacaaatagctttaccagggcaattcctcgccaaaaccagcgactaccta
cccggcccaggaacacacattcacgagtcgcaaatctacgcctcaatcgctggacccgtc
atatccacaccctcttcttccaccacaaactcaacctccaaatccagcaacctcacacct
ctcctctcaataacgcgccccccaagctcgaccgaccccggcatcctaggccccaactca
ggcgccggcatcccgctcctccccactgtctccagcaccgtcctcgtgcgcataacacgc
ctcggcccacgctttgcctcctgcgagatcctcgtcattgacaatctcgtatgccgtgaa
gccttcgtagcgcagatccggcgtgaagacatccgcgctacggaaaaggacaagatcaag
attgaagagagcttccgcgtgggcgaccttgtgcgcgggactgtgatcagtttgggagat
agtgggaattactatgtcgcgacggatgcgaatgagtatggtgtggtgctggccaggagc
gaggagggcaggattatgcatccggttagttggaaggagtttagggatccggttagtggg
aaggctgagttgagaaaggcggcgaagccgttttga
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