Pyrenophora teres: PTT_09858
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Entry
PTT_09858 CDS
T01613
Name
(GenBank) hypothetical protein
KO
K14848
ribosome assembly protein RRB1
Organism
pte
Pyrenophora teres
Brite
KEGG Orthology (KO) [BR:
pte00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pte03009
]
PTT_09858
Ribosome biogenesis [BR:
pte03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
PTT_09858
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_RIG_2nd
CAF1C_H4-bd
WD40_WDHD1_1st
WDR55
Beta-prop_EML
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
MIOS_WD40
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_NUP159_NUP214
WDR90_beta-prop_4th
Beta-prop_SCAP
PDS5
UL41A
Motif
Other DBs
NCBI-ProteinID:
EFQ92936
UniProt:
E3RMW3
LinkDB
All DBs
Position
Unknown
AA seq
492 aa
AA seq
DB search
MSKRQADSEQEQEAIKNGERPMEIDQNEAGEFEDEFEDEFESEDEILEAGVDGRPDEERE
AEEREHGMDVDQDTFIPGRHKLSPGETLNPDLSTYEMLHALEAPWPCLSCDIIPDRLGSD
RKTYPATVYSVAGTQAARGRDKDNQIMVMKMSSLSRMEKEDDEDDEDDSDDEASDPILET
KSIPLTSCTNRIRAHQTPQATSAQPPTTLTAAMTESGQVLIHDVTPHLTAFDTPGTTISP
SQNKPICTIRAHGSNEGYALDWSPLISEGKLLTGDSVGNIFATTRTQGGGFVTDTTPYTG
HKGSIEELQWSPTEKHVFSSASNDGTVKIWDARSKSRKPVLSVQASKTDVNVLSWSHQTA
HLLASGADDGEWAVWDLRQWKPSTDMSNDKKPSPVASYTFHKEQITSVEWHPTDDSIVLV
CAGDNTLTLWDLAVELDDEESKYTAGVQDVPPQLLFVHYMDQIKEAHWHPQIPGAIMATG
GSGFNVFKTISV
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagcgacaagcagactcagagcaagagcaggaggctatcaagaatggcgagcga
cccatggaaattgaccaaaacgaggcgggagaatttgaagacgaattcgaggatgagttt
gagagcgaggacgagatattagaggccggtgtagatgggcggccggatgaggagcgtgaa
gctgaagagcgcgaacacggcatggacgtcgaccaagacactttcatacccggtcggcat
aaactatcgccaggcgaaaccctcaaccccgatctctctacatacgagatgttgcacgca
ctagaagcgccatggccctgcctctcctgcgacatcataccggatcgcctcggttcagac
cgcaagacataccccgcaaccgtatactctgtcgccggcacccaggcggcgcgggggagg
gacaaagataaccagatcatggtcatgaagatgagcagtctgtcacggatggaaaaggaa
gacgacgaagacgacgaggacgattccgacgacgaggcctcagaccctatactagaaaca
aagtcaatacccttgacaagttgcaccaaccgcatacgagcacaccaaacaccacaagct
acatctgcccagcctccaaccaccctcactgctgccatgactgagtccggccaagttctc
atccacgatgtcactccacacctcacagccttcgacactcccggtaccacaatctcaccc
tcgcaaaataagccaatctgcacaatccgcgcacacggatccaacgagggctacgcgcta
gactggtcgcctttgatatcagagggaaagcttttgacaggtgacagcgttggaaacatc
tttgcgacaacacggacacaggggggcggtttcgtgacagacactactccatataccggc
cacaaaggttcaatcgaggagctgcagtggtcgccaaccgaaaagcacgtcttctcctca
gcgtcgaacgacggcaccgtcaagatctgggatgcgcgctcaaaatcacggaaaccagtt
ctcagcgtacaagcctcgaaaacagacgtcaacgtactcagctggtcgcaccagaccgca
catctcctcgctagcggcgccgatgacggtgaatgggcagtctgggatctgcgacaatgg
aagccttccactgacatgtccaacgacaagaagccctcaccagtcgcatcctacaccttc
cacaaggagcaaattacctcggtcgagtggcatcctacagatgacagcattgtccttgtt
tgcgccggcgacaacaccctcacattatgggacctggccgttgagctcgacgacgaggag
agcaaatatacagccggtgtgcaagacgtgccgccacagttgctgttcgttcactacatg
gatcaaatcaaggaggcgcactggcacccgcagattccgggagccatcatggctacaggt
ggctcgggtttcaatgttttcaagacgattagtgtatag
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