Pyrenophora teres: PTT_10587
Help
Entry
PTT_10587 CDS
T01613
Name
(GenBank) hypothetical protein
KO
K10755
replication factor C subunit 2/4
Organism
pte
Pyrenophora teres
Pathway
pte03030
DNA replication
pte03410
Base excision repair
pte03420
Nucleotide excision repair
pte03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pte00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PTT_10587
03410 Base excision repair
PTT_10587
03420 Nucleotide excision repair
PTT_10587
03430 Mismatch repair
PTT_10587
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pte03032
]
PTT_10587
03036 Chromosome and associated proteins [BR:
pte03036
]
PTT_10587
03400 DNA repair and recombination proteins [BR:
pte03400
]
PTT_10587
DNA replication proteins [BR:
pte03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
PTT_10587
DNA Replication Termination Factors
ELG1-RFC complex
PTT_10587
Chromosome and associated proteins [BR:
pte03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
PTT_10587
DNA repair and recombination proteins [BR:
pte03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
PTT_10587
Check point factors
HRAD17(Rad24)-RFC complex
PTT_10587
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Rep_fac_C
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
RuvB_N
AAA_22
AAA_11
AAA_assoc_2
AAA_16
SLFN-g3_helicase
Mg_chelatase
AAA_28
AAA_7
DUF815
AAA_5
AAA_19
AAA_24
DEAD
AAA_14
ResIII
bpMoxR
AAA_30
ATPase_2
AAA_3
RNA_helicase
Hydantoinase_A
AAA_2
DUF4863
Flagellin_N
Motif
Other DBs
NCBI-ProteinID:
EFQ92339
UniProt:
E3RPK8
LinkDB
All DBs
Position
Unknown
AA seq
418 aa
AA seq
DB search
MADFFNIKARQQAAAQASSSKAPTTKQEPNRLQPWVEKYRPKTLSEVTAQDNTIQILSRT
MQSSNLPHMLFYGPPGTGKTSTILALAKELYGPELMKSRVLELNASDERGISIVRQKVKD
FARQQLSVAPNYNIMVEDKSSGEAKTVRYRDKYPCPPFKIIVLDEADSMTQDAQSALRRT
METYSRMTRFCLVCNYVTRIIDPLASRCSKFRFKSLDQGNAVKRVSDIAKLENVSLEDDV
AEELVRVADGDLRKAITFLQSAARLVGAVQAANGGGAGASKKGKKKVVVEEDEMDVDAPP
TSTPAISLPIIAEIAGVLPPATLSTFSDSLFPKSASAKQIRYNEIAKIVENMIAEGWSAQ
QTVGQLYEQIMFDERIEDVKKVRLAGVFSETDKRLVDGGDEHLAVLDLGVRVAGVLCL
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggcagactttttcaatatcaaggcacggcagcaggccgctgctcaagcaagctcctcc
aaagcacccacaacaaagcaagagcccaatcgcttgcagccatgggtcgagaaataccgc
cccaagacgctctcagaagttacagcccaagacaacacgattcaaatactgtcccgcaca
atgcaatcctcgaacctaccccacatgctcttctacggccccccaggcaccggcaaaacc
tccaccatcctcgcccttgccaaagaactctacggccccgaacttatgaagagccgtgtg
ctcgaactgaacgcttcagacgagcgcggcatcagcatcgtgcgtcagaaagtaaaagac
tttgcgcgccagcagctcagcgtagccccaaactacaacatcatggttgaagacaagagc
agcggcgaagcaaaaacggtgcgctacagagacaaatacccgtgtccgccattcaaaatc
atcgtgctggacgaggcggatagtatgacacaggatgcgcagagcgcgctccgtaggact
atggaaacttacagtcgcatgacgagattctgtcttgtgtgcaactacgtaacccgtatt
atcgatcctctggcttctcgatgcagtaaattccggttcaagagcctggatcaggggaac
gctgtcaagcgcgtgagtgacattgcgaaattggagaatgtgagcttggaagacgatgtt
gcagaagaattagtcagagttgccgatggcgatttgagaaaggcaattacattcttgcaa
tctgccgctcgcctggtcggcgctgtacaagccgccaatggcggcggtgccggtgcctcg
aaaaagggcaagaagaaggtcgtggtcgaagaggacgaaatggacgtcgacgcaccccca
acctcaacccctgcaatctccctccccatcattgccgaaatcgcaggtgtcctcccaccc
gccacgctctccaccttttcagactcgctgtttcctaagtcggcatccgcgaaacagatt
cggtataatgagattgccaagattgtggaaaatatgattgcggaggggtggagcgcccag
cagaccgtgggccagctgtatgagcagattatgtttgatgagaggatcgaggatgtcaaa
aaggtcaggcttgcgggcgtgtttagtgagacggataagaggctggtggatggtggggat
gagcatttggctgtgttggatttgggggttagggttgcgggggtgttgtgtctgtaa
DBGET
integrated database retrieval system
