Pyrenophora teres: PTT_10878
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Entry
PTT_10878 CDS
T01613
Name
(GenBank) hypothetical protein
KO
K10756
replication factor C subunit 3/5
Organism
pte
Pyrenophora teres
Pathway
pte03030
DNA replication
pte03410
Base excision repair
pte03420
Nucleotide excision repair
pte03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pte00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PTT_10878
03410 Base excision repair
PTT_10878
03420 Nucleotide excision repair
PTT_10878
03430 Mismatch repair
PTT_10878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pte03032
]
PTT_10878
03036 Chromosome and associated proteins [BR:
pte03036
]
PTT_10878
03400 DNA repair and recombination proteins [BR:
pte03400
]
PTT_10878
DNA replication proteins [BR:
pte03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
PTT_10878
DNA Replication Termination Factors
ELG1-RFC complex
PTT_10878
Chromosome and associated proteins [BR:
pte03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
PTT_10878
DNA repair and recombination proteins [BR:
pte03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
PTT_10878
Check point factors
HRAD17(Rad24)-RFC complex
PTT_10878
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
Rad17
DNA_pol3_delta2
AAA_16
AAA_22
AAA_24
RCF1-5-like_lid
AAA_11
AAA_assoc_2
AAA_5
AAA_30
DUF815
RuvB_N
AAA_19
AAA_3
ResIII
Mg_chelatase
AAA_14
PhoH
SLFN-g3_helicase
Sigma54_activat
DEAD
AAA_28
bpMoxR
AAA_7
ATPase_2
AAA_18
AAA_25
nSTAND3
RNA_helicase
TniB
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
EFQ92093
UniProt:
E3RQA1
LinkDB
All DBs
Position
Unknown
AA seq
393 aa
AA seq
DB search
MSDFEDEMDVDAPAVDNSISFGGDQKKGKRSAANLPVEAEDSLPWVEKYRPNSLDDVEGH
KDIIATINKFVDSNRLPHLLLYGPPGTGKTSTVLALARRIYGNKNMRQMVLELNASDDRG
IDVVREQIKTFSSTKQIFASAPKTGDSSLATFKLIILDEADAMTATAQMALRRIMEKYTA
NTRFCIIANYTHKLSPALLSRCTRFRFSPLKDQDIRNLVDKVIEDEKVNITQDATGSLVT
LSKGDMRRALNVLQACHASSTPLQPPGKPAVDPNTIVRDQITQTTIYDCIAAPHPSDIKY
ILETLLSKNDMTECLRTVNNLKIMKGLALADILTAVSEELVTNDVPPQVMVTWMSGLADI
EYRLSGGGSETIQTGAAIGVVRTGVELLENGKR
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgtccgactttgaagatgaaatggacgttgatgcgcctgctgtggacaactcaataagc
ttcggcggagaccagaaaaagggcaagcggagtgctgcaaatctgcctgtagaagctgaa
gattccctaccatgggtcgaaaagtacagaccaaactcgctagacgatgtagaaggtcac
aaggacataatagcaaccattaacaagtttgtcgactcaaaccgacttccccatctcctt
ctatatggccccccaggaaccgggaaaacatcgaccgtcctcgcactcgcacgacgcata
tacgggaacaagaacatgcggcagatggtgctcgagttaaatgcttcagatgatcgaggt
atcgacgtagtaagagagcagatcaagacattcagtagcaccaagcaaatcttcgcctcc
gcgcccaagactggagactcgtcgcttgcgaccttcaagctcatcatccttgatgaggca
gatgccatgactgcgaccgcccagatggcactgcgaagaatcatggagaagtacacagca
aacacgcgcttctgtatcattgcaaactacacacacaagctctcgccggcactactctcg
cggtgtacgaggttccggttctctcctctcaaggaccaggacattaggaacttggtcgac
aaggtcattgaagacgaaaaggtcaatatcacacaggacgctacaggctcgctcgtcacg
ctgagtaaaggagatatgaggcgagcacttaacgtgttgcaggcttgtcacgcttcaagc
acgccgcttcagccaccgggcaagccagcagtagacccaaacaccattgtgcgcgatcag
atcacccagacgaccatctacgactgcatagcagccccacatccctccgacatcaaatac
attctcgaaacgctactttcgaagaacgatatgaccgagtgtttacggacagtcaacaac
ttgaagataatgaagggattggcactggcagatatcctcacggcggtcagcgaagagctc
gtcaccaacgatgtccctccacaagtcatggtcacatggatgtcaggcctagcagacatt
gaatacaggttaagtgggggtggtagtgaaaccatccagacgggtgcagcaattggtgtt
gtgaggacaggtgtagagctactagaaaatggaaagaggtga
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