Pyrenophora teres: PTT_12520
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Entry
PTT_12520 CDS
T01613
Name
(GenBank) hypothetical protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
pte
Pyrenophora teres
Brite
KEGG Orthology (KO) [BR:
pte00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
PTT_12520
Enzymes [BR:
pte01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
PTT_12520
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Paralog
GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
NOMO1-like_2nd
Motif
Other DBs
NCBI-ProteinID:
EFQ90809
UniProt:
E3RTZ1
LinkDB
All DBs
Position
Unknown
AA seq
547 aa
AA seq
DB search
MRFLATFTAFLLAPAAVFAAWGYTDDGKNYVIDTGANLVVKVSKTNADMTSIKYRGVEYN
GQNGKNSHVESGLASGTVTIKQYTTPANIIKVTMKVGTLVHTLIFRYGNPNVYIFMNKKD
TSITVSRYILRIPGGIFKNNVNEDTDWVPDGAAVIESGDINGINGQTWSKHYSGKKYGRT
IDYDYVGYTNANVGMYLIRSDHEKASGGPFFRSLIRRGGSGGPDLYDIYHYNMGHTDVMR
FGLQGPSVLHFTDSGAAPNNNLFARRADWGWLDSLEIDGWVPASRRGSVAGVGLANTKSG
FQYVVGLKSAQAQYWTIATGAWRIDKVLPGDYTLTVYKGELEVHTSTVTVTAGGTITRNT
ITCSDPADTAVIWRIGDWDGTPKGFLNFGDTPMKPTYMHPSDSRLAKWDAGNYIIGTSTP
SGFPGYMWKDINNDHLVYFRLTDAQLAKGAKIRIGVTEGMAGGRPSISIGSWNAPLQGDK
GQADTRSLTVGTYRGNNYIYEYNVPASAWVKSAREYQILKISVISGKTSTGYLSPGVSFD
AIDMIGA
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgcgatttctcgcgactttcacggcttttctcctggccccggctgccgtcttcgcagct
tggggctacactgatgacggcaagaactatgtcatcgatacaggcgcaaaccttgttgtc
aaggtcagcaagaccaacgcagatatgacatccatcaagtaccgtggcgttgagtacaac
ggtcagaatggcaagaactcgcacgtcgaatccggacttgcatcaggcactgtaactatc
aagcagtacaccaccccggccaacatcattaaagtcaccatgaaggtgggaactcttgta
catacgcttatcttccgctatggcaacccgaacgtgtacatcttcatgaacaagaaggac
accagcatcactgtgtctcgatatattcttcgtatacctggcggcatcttcaaaaacaac
gtcaacgaagacaccgactgggttcctgatggcgccgcggttattgaatcaggtgatatc
aacggtatcaatgggcaaacgtggtccaagcactactccggcaagaagtacggtcgcact
atcgactacgactatgtcggctacacgaacgcaaatgttgggatgtatcttatccgttcc
gaccatgagaaggcttcaggtggaccttttttcaggagcttgatccgacgtggtggaagc
ggcggcccagatctatacgatatctaccattacaatatgggtcacactgatgttatgcgc
ttcggacttcaaggcccctctgtgcttcacttcaccgacagcggcgctgcgcctaacaac
aaccttttcgcacgaagggctgactgggggtggctcgactctctcgaaattgatggctgg
gtgccggctagccgccgtggctctgtagcgggtgtcggtcttgctaacacgaagagcgga
tttcagtatgtcgttggtctgaagagtgcccaggcgcaatactggaccatagcgactggt
gcctggagaattgacaaagttctacctggagactataccttgactgtgtacaaaggcgaa
cttgaggttcatactagcactgttactgtcactgcgggcggaacaataacgcgaaacacc
atcacttgcagcgaccctgccgacactgctgtcatctggcgtatcggtgactgggatgga
acccccaagggctttttgaactttggagacacgcctatgaagccgacttacatgcatcca
tccgactcacgcctggctaaatgggacgctggaaactatatcattggcacaagcacacct
tctggatttcctggttatatgtggaaggacatcaataacgaccacctcgtctacttccgt
ctcactgatgcacagctagccaagggtgctaagatcaggatcggcgtcactgagggaatg
gccggaggacgaccaagtatctctataggcagctggaacgctcctttgcagggtgacaag
ggccaagccgataccaggagtttgaccgtgggaacttacagaggcaacaactacatttac
gagtacaatgtcccagcaagtgcttgggtgaagagcgcaagagagtatcagattctgaag
atttcggttatttctgggaagacgtcgacagggtatcttagtcccggcgtgagcttcgat
gcgatcgacatgatcggggcttga
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