Pyrenophora teres: PTT_13907
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Entry
PTT_13907 CDS
T01613
Name
(GenBank) hypothetical protein
KO
K15171
transcription elongation factor SPT4
Organism
pte
Pyrenophora teres
Pathway
pte03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pte00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
PTT_13907
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pte03021
]
PTT_13907
03019 Messenger RNA biogenesis [BR:
pte03019
]
PTT_13907
Transcription machinery [BR:
pte03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
PTT_13907
RNA polymerase I system
PTT_13907
Messenger RNA biogenesis [BR:
pte03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
PTT_13907
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt4
Ig_TMEM132_5th
Motif
Other DBs
NCBI-ProteinID:
EFQ89723
UniProt:
E3RX25
LinkDB
All DBs
Position
Unknown
AA seq
289 aa
AA seq
DB search
MARKGRATIKTPDKYMTVDSDSEDESPSAVVPKPRNSRSTRPEGGYHANDEETDNVDLVA
SRDGLNLSIAPASGPPDGRRQPRQDARAGGQSTSLAHLLFPHNNSDTPLPSIEDSTLTTP
APISRNQPQSSSRLQTFAKQPVRTTGKAGGQGRDNTDDSDMSNRPIQGGAYIPPNQQRNM
RACMVCSVVRTQQQFLTEGCPNCEDVLELAGNPEQINDCTSQVFDGLISVSDTSRSWVAR
YQRLEGYRPGVYATQVEGILPDDVIGLVESAGINYVPRDGSEQDTLPRD
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcaagggtcgcgcaaccataaagacgcctgacaagtacatgactgtcgattcg
gatagtgaagacgaaagtccttctgctgtcgtccccaaaccgaggaacagtcggtcaact
agacctgaggggggttaccatgcgaacgacgaggagacggacaacgtcgatctcgtggct
tcgcgtgatggcctaaacctctctatagcgccagcgtcaggtccaccagacggccgccgt
cagcctcgccaagacgcgcgagccgggggacaaagcacctcacttgcacatttactgttt
ccacacaacaatagcgacacgcctcttccctccatcgaagactctaccctcactacacct
gcacccatttcccgaaaccagccacaatcctcctcccgccttcagacttttgcaaaacaa
cctgtgcgcactactggcaaagcaggcggtcaaggtcgcgacaacaccgacgactccgat
atgtccaacagaccgatccagggtggcgcctacattccgcctaatcagcaacgtaacatg
cgcgcctgcatggtctgctccgttgttcgaacccagcagcagtttctgaccgaaggctgc
cccaactgcgaagacgtcctcgagctcgccggcaaccctgaacagatcaacgactgcaca
tcccaggtcttcgatggcctcatttcagtatcggatacctcgaggagctgggtcgccaga
tatcagcgtcttgaaggctacaggccaggtgtctacgccacccaggtcgaaggcatcctg
ccggacgacgttattggccttgtggagagcgccggcatcaactacgtccccagggatggc
agcgagcaggacacacttccccgagactag
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