Pyrenophora teres: PTT_14452
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Entry
PTT_14452 CDS
T01613
Name
(GenBank) hypothetical protein
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
pte
Pyrenophora teres
Brite
KEGG Orthology (KO) [BR:
pte00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pte03019
]
PTT_14452
03041 Spliceosome [BR:
pte03041
]
PTT_14452
03036 Chromosome and associated proteins [BR:
pte03036
]
PTT_14452
Enzymes [BR:
pte01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PTT_14452
Messenger RNA biogenesis [BR:
pte03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
PTT_14452
mRNA cycle factors
Common to processing body (P body) and stress granule
PTT_14452
Spliceosome [BR:
pte03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
PTT_14452
Chromosome and associated proteins [BR:
pte03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
PTT_14452
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
EFQ89342
UniProt:
E3RY72
LinkDB
All DBs
Position
Unknown
AA seq
599 aa
AA seq
DB search
MAEQLDMGRLNINDSQHNPQNGFNGERSAYIPPHLRGRPQGGPGGPGPAPMDGPPPMMNG
GGGLGGSAWGPAGHGPPPMNGAGGQAGGWANAPNFTPRGRDGPQGGGGGWGGAPRGNFDP
NAYGKPGGGGSGGARGSGDGAWKDGKHVPGPPNQRLERDLFGVPNDPSKQQTGINFEKYD
DIPVEASGQGVPEPVTRFTNPPLDDHLLSNIELSGYKVPTPVQKYSIPIVMGGRDLMACA
QTGSGKTGGFLFPILAQAFQNGPSPPPQQAQGGYGRQRKAYPTSLVLAPTRELVSQIFDE
ARKFAYRSWVRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLASIKYLV
LDEADRMLDMGFEPQIRRIVEGEDMPPTAGRQTLMFSATFPRDIQMLARDFLKDYIFLSV
GRVGSTSENITQKIEYVEDVDKRSVLLDILHTHDPTNLTLVFVETKRMADSLSDFLINQG
FPATSIHGDRTQREREKALEMFRNGRCPILVATAVAARGLDIPHVKHVVNYDLPTDIDDY
VHRIGRTGRAGNTGIATAFFNRGNRGVVRDLLELLKEANQEVPGFLESIAREGSGFGGG
NT seq
1798 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacaactcgacatgggtcgtttgaacatcaacgactcacagcacaacccccag
aacggcttcaacggcgagcgttctgcgtacattccccctcaccttcgcggtcgtcctcag
ggaggccccggtggccctggtcctgcgccgatggacggccctcctccaatgatgaatggc
ggtggcggacttggaggtagcgcctggggaccagcaggtcacggtccccctccgatgaac
ggcgctggcggccaagctggcggctgggccaacgcaccaaacttcactccccgcggccgc
gacggccctcaaggtggtggtggtggatggggcggtgctcctcgcgggaactttgacccc
aacgcctatggcaagcccggtggcggtggttcaggaggagctcgtggatccggtgatggc
gcctggaaggatggcaagcacgtccctggccctcccaaccagcgtctcgaacgcgatctc
tttggtgtccccaacgacccctcaaagcagcaaaccggtatcaatttcgaaaagtacgat
gatatccccgtcgaggcttctggccaaggcgttcccgaacccgtcacacgtttcacgaac
ccgcccctcgatgaccatttgctgagcaacatcgagctctccggatacaaggttcctact
cctgtacagaagtactctattcccatcgtcatgggcggacgcgatcttatggcttgtgcc
cagactggttctggaaaaactggtggtttcctcttccccatcctcgcacaggccttccag
aacggtccttctccccctcctcagcaggcacaaggcggttacggccgtcagcgcaaagca
taccccacctctctcgtcctcgctcccacacgtgagttggtttcgcagatcttcgacgag
gcccgcaagttcgcctaccgctcgtgggtacgtccttgtgttgtgtacggtggtgccgac
attggttcccagcttcgccagatcgagcgcggatgcgatcttcttgtcgctacccctggt
cgtcttgtcgacttgattgagcgcggccgtatctccctcgctagcatcaagtaccttgtt
ctcgacgaggctgaccgcatgttggacatgggtttcgagcctcaaatccgccgcatcgtt
gagggcgaggacatgccgcctactgctggtcgccagactctcatgttttcggccacgttc
ccccgcgacatccagatgcttgcccgcgatttcttgaaagactacatcttcctttcagtc
ggtcgcgtcggttccacatcagagaacattactcagaagattgaatacgtcgaagatgtt
gacaagcgctccgtccttctggatattcttcatacccacgaccctactaacctgacgctt
gtcttcgtcgaaaccaagcgcatggccgactctctgtccgacttcctaatcaaccaaggc
ttccccgccacctccattcacggagaccgcactcaacgtgagcgtgagaaggccctggag
atgttccgaaatggacgatgcccgatccttgtcgctactgctgtggctgctcgtggattg
gatattccgcacgtgaagcatgtggtcaattacgatctgcctacagacatcgatgattac
gtgcatcgtattggacgtactggtcgtgcaggaaacactggtattgccactgctttcttc
aaccgcggcaaccgcggtgttgtgcgcgacctactcgaactactgaaggaagctaaccag
gaagttcctgggttcctggagtcgattgctcgcgagggctcaggcttcggtggtggtg
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