Pyrenophora teres: PTT_15143
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Entry
PTT_15143 CDS
T01613
Name
(GenBank) hypothetical protein
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
pte
Pyrenophora teres
Pathway
pte03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pte00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PTT_15143
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pte03041
]
PTT_15143
Enzymes [BR:
pte01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PTT_15143
Spliceosome [BR:
pte03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
PTT_15143
Complex C
U5 SnRNP specific factors
PTT_15143
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
Helicase_PWI
ResIII
BRR2_plug
Helicase_C
SET
Motif
Other DBs
NCBI-ProteinID:
EFQ88808
UniProt:
E3RZP1
LinkDB
All DBs
Position
Unknown
AA seq
2223 aa
AA seq
DB search
MSKDQNNLAQFKYAAMSNLVLQVDRRFTNPRRPDEHTGDPESLAGRINIRDMGGRTGRDS
ANAQAKKLKGPGVERGNLGEGGDVLEREQRKRKRDDGTSGFGAIATADLNIEGLTYKPRT
PATRQTFEFITTIVSRALGDVDPATTRSAADQVLEYLKDDNMKDFDKKKEVDDLLGTSMG
AKEFNELVNLGKKITDYDAQDEDEGGDEEMADGEGADNGDNQGVAVVFDDEEEDEDGPQT
FEVRDGDSSDEDEGEAPIEQIGEDQDMKGGGFVDTEETIIQGDTAASDAKSAADQLIPAH
EIDAYWLQRQIGQIYEDAHIQQEKTRDALKYLAGVSDDGEEKELREIENDLMDLFDYEHH
ELVAKLVLNRDRVVWVTKWRRAAEDNDERTAVEREMKAAGQQKILQELRARETGIKAEDG
AGAGKMKFNLKDISLPETSNDVEMADAKPEGIVGGLQPSSRLVNLDNIVFDQGNHLMTNA
SVKLPQGSTRRQFKGYEEIHVPAPKAKRDPNEPALMPTSELPDWARVGFGNSKSLNRIQT
KCFPTAFNDDGNMLICAPTGSGKTNVAMLTMLREIGKHRNPQTGEIALDDFKIIYIAPLK
ALVAEQVGNFGKRLEPYGIKVSELTGDRQLTKQQIAETQIIVTTPEKYDVITRKATDTSY
INLVRLICIDEIHLLHDDRGPVIESIVSRTLRRSEQTGDQVRIVGLSATLPNYRDVASFL
RVDPDKGLFHFDATFRPCPLKQEFIGVTDKKAIKQLKTMNDVCYTKVLEQVGEHRNQMLI
FVHSRKETAKTAKYIRDKALEEESIGKILRSDAASREILREESESVQNADLKDLMPYGFG
IHHAGMSRADRTSVEDLFADGSIQVLVCTATLAWGVNLPAHTVIIKGTQIYSPEKGSWVE
LSPQDVLQMLGRAGRPQYDTYGEGIIITTQAEIQYYLSLLNQQLPIESQLVSKLADNLNA
EIVLGNVRNRDEAVDWLGYTYLFVRMLRSPALYRVGPEYENDTVLEQRRVDLVHAAAHVL
EKCSLIKYDRKTGALNPTELGRIASHYYITHNSMATYNMHIQPGISAIELFRVFALSEEF
KYIPVRQDEKIELAKLLGKVPIPVKEGVEEAQAKINVLLQAFISRLKLEGLALMADLVYV
TQSAGRILRAIFEICLKKGWSQVAKLALDMCKMAEKRMWPTMTPLRQFPTCPRDIVQKAE
RIDVTWPSYFGLDPPSMGELLGMPKAGRLVCGLVEKFPRLQIEATPRPVTRSLLRLELTI
RPDFTWDTELHGASEAFWILVEDCDGEQILFHDTFILRRDYSDGDANEHTMELTVPIDDP
MPPNYFITVLSDRWMASETKLAVSFQKLILPAKFPAHTPVLDLQPLPVSALKRKEYMGLY
ENVGRFNKVQTQTFNTLYTTDDNALVGAAAGIGKTICAEFAILRHWATDNEGRIVYLAPF
QELVDNQYKNWNERLSGLSGGKDIVKLTGETTADLRLLEKGDLILATPSQWDSLSRQWQR
RKNVQSIALLIADELHMLGGSNGHVYEIVVSRMQAMATQIESKLRIIGLAVSLANARDIG
EWIGATKHTIYNFSPAIRAVPLELKIQSFTIPHFPSLMMAMARPTYSAITQMSPDKPAMV
FVPNRKQARSSASDLFNACIADENEDRFLNVDLTEIQPILEKINEHSLAESLSHGIGYFH
EALNTFDKRAVQHLFKVGAVQVLIVSRDSCWEVDSSAHLVVVQGTQFYEGREHRYRDYPI
SDILQMFGKAGRVGVDKSAKGVLMLPAVKREYYKKFLNEALPIESHLPDYLHDAFVAEIS
AKTIESTQEAVDWSTYTYFYRRLLANPSYYNLHSTSHEGLSAHLSDMVEQTLKELTEAQL
IEHDEDEDSITPLNPCMIAAYYNISFITMQTLMMSLNGRTSLKGVLEIITAATEFEDIQI
RRHEDHILQRIYDRVPFKMAEPNFETPHFKAFVLLQAHFSRMQLPIDLAKDQETVLRKVL
NILSASVDVLSSEAHLNAMSAMELSQMVVQAMWQKDSPLKQIPHFDADTIKAAQKFDIND
VDDFINAMDPDENPDYKKLIAALDVDQRQLADIANFTNNFYPNVELELQLVDPENIASNS
PAQLKVRVTRNIEEDEELKTEVHAPFYPADKTESWWLVVGDQKERTLLAIKKVPILRKLE
TVLEFTLEKPGKHELNCYLVSDSYLGVDQAPPFTVDAAEGMEEDSEEEEDEEDEDVKDVK
PAI
NT seq
6672 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaagaccagaacaatctggcgcagtttaaatatgcggccatgtcgaatttggtc
ctgcaggtcgacaggcgctttacaaacccgcgccgaccggacgagcacactggcgatcct
gagtcgctcgcaggccgcattaacatccgagacatgggaggacggacggggcgcgacagt
gcgaatgcgcaagcaaagaagctcaagggacctggcgtcgaacgaggaaacctgggtgaa
ggtggcgacgtactggagcgtgagcagcgaaagagaaaacgggacgatggtacgagtggg
tttggagctattgctactgccgacttgaacatcgaaggcctcacatataaaccacggacg
cccgcaacccgccagacattcgagttcatcaccaccattgtgagccgagctctcggcgat
gtcgaccccgcgaccacacgaagtgcggcggatcaggtcctcgaatatctcaaagatgac
aacatgaaggactttgacaagaaaaaggaagtggacgatctcctcggaacctccatgggc
gcaaaggagttcaacgagcttgtaaacctcggcaagaagatcaccgactatgatgcccag
gacgaggacgagggaggcgatgaagagatggctgatggtgagggcgccgacaatggcgac
aatcagggtgtagctgtcgtgttcgacgacgaagaggaggacgaagacgggccccagacg
ttcgaagtccgagacggcgatagctcggatgaagatgagggagaggcgccgattgagcag
attggagaggatcaggatatgaagggtggcggctttgtggacacagaggagacgataata
cagggcgacacagctgcttcagatgcgaagagcgccgcagaccagctcattcctgcacac
gaaatagacgcgtactggctacaacggcagattgggcaaatatacgaggatgcgcatatc
caacaagagaagacacgggacgcgctcaagtatctcgcaggagtctcagatgacggtgag
gagaaggagttgcgcgagatcgaaaacgaccttatggatcttttcgattacgaacaccac
gagctggttgcgaaacttgtgctcaaccgcgatagagttgtctgggtcacaaagtggcga
agagctgcagaggacaacgatgagcggacggcagtcgagcgggagatgaaagctgcgggg
cagcaaaagatcttgcaagaactgcgcgcacgagagactggcatcaaggccgaggatggc
gctggcgctgggaagatgaagttcaacctcaaggacatcagcctcccagaaacttcgaat
gatgtggagatggctgatgcgaagcctgagggcattgttggaggcctacaaccatcgagt
cggctcgtcaacctggacaacattgtttttgaccagggaaaccatctcatgacaaacgct
agcgtaaagctgccgcaaggctctacccggcggcagttcaagggctatgaggaaattcac
gtacctgcaccgaaagcgaaacgcgaccccaacgagccagcattgatgcctacctctgag
ctaccggactgggcacgagtaggtttcggtaactccaaatcgctcaatcgtatccagacg
aagtgtttcccgacagccttcaacgatgacggaaacatgttgatctgtgcgcccacggga
tctggaaagaccaacgttgccatgttgactatgctccgggaaatcggaaagcatcgcaac
ccccagaccggagagatcgcactggacgacttcaagatcatctatatcgctccgctcaag
gctttggtggccgaacaagtcggtaactttggcaagcgtctcgaaccctacggcatcaag
gtatctgagcttactggtgatcgccaactcaccaagcagcaaatcgctgagacccagatc
attgtcaccactcccgaaaagtacgatgtcatcactcgtaaagctaccgacacgagctac
atcaacctggttcgcctcatctgtattgacgagattcatcttctccatgacgaccgtggt
ccggtcatcgagagcatcgtcagtcgaacccttcgacgcagcgagcagactggtgatcaa
gtacgcattgtaggactgagtgctactcttccaaactaccgcgacgtggcgagcttcctc
cgtgtagaccccgacaaaggtcttttccactttgacgctaccttccgtccttgtccgctg
aagcaggagttcattggtgtcacggacaagaaggctatcaaacagctgaagaccatgaat
gacgtctgctacacgaaagtattggagcaggtcggtgaacaccgcaaccagatgctgatc
ttcgtacactcacgaaaagagactgcgaagacggcaaagtacattcgtgacaaggcacta
gaggaggagtcgataggaaagattcttcgatcggatgccgccagtcgagagatcctaagg
gaggagtctgagtcagtacagaacgcagacctcaaggaccttatgccatatggctttggt
atccatcacgctggtatgtcgcgagcggatcgtacttccgtggaggacttgttcgccgat
ggctcaatccaggtcctcgtgtgcacagcaacacttgcttggggtgtcaacttgcctgca
cataccgtcatcatcaagggaacgcagatttactctcccgagaagggtagctgggtcgaa
ctaagcccacaggacgttttgcagatgttgggtcgtgccggtcgacctcagtacgatacc
tatggagaaggtatcattatcaccacacaggccgaaatccaatactatctgtcactgctc
aaccaacagctgcctattgagtcgcaactggtcagcaagcttgcagataatctcaacgct
gagatcgtgcttggaaacgtacgcaacagagatgaagcggtggactggctcggttacacg
tacctcttcgtcagaatgcttcgatcgccggctttgtaccgtgtggggccggagtatgag
aatgacactgtactagagcagcggcgagtggaccttgtccacgcggctgcgcacgtccta
gagaagtgcagcctcatcaagtacgacaggaagactggagcgctgaacccgaccgagctt
ggaaggatcgcatcccattactacatcacacacaactccatggcaacatacaacatgcac
atccagcctggcatcagtgcaattgagttgttccgtgtgttcgcactcagtgaggaattc
aagtacatccctgtccgtcaagatgagaagatcgagctcgcgaagctactaggaaaggtc
ccgattcctgtcaaggagggcgttgaagaggctcaagccaagatcaatgttcttctacaa
gctttcatctctcggctcaagctggaaggactggcgctcatggctgatctggtttacgtc
acacagtcagctggacgtatcctgcgtgcgatcttcgagatttgcctcaagaaggggtgg
tctcaggttgccaagttggctcttgatatgtgtaagatggcagagaagcgcatgtggcct
acgatgacaccacttcgacagttccctacttgcccaagggatatcgtacagaaggcagag
cgtattgatgtcacatggccaagctactttggccttgacccgccaagcatgggcgagctg
ctaggcatgcccaaggctggcagacttgtctgtggtttggtagagaagtttccacgccta
cagatcgaggccacaccgcgaccggtgaccaggtccttactccgcttggaactcactatt
cgacccgactttacttgggatacggagctacatggagcttcagaagccttctggattcta
gtagaggactgtgacggcgagcagattttgttccacgacaccttcatccttcgacgggac
tattctgatggtgatgccaacgagcacaccatggagctgacggttcccatcgatgaccct
atgccacccaactatttcatcactgttctctcggatcgatggatggcatctgagacgaag
ctcgcagtgtcttttcagaaactcattcttccggccaaattccctgcccatacccctgtc
ttggacctacaacctctaccagtttctgctctcaagaggaaggagtacatgggcttgtac
gagaatgtgggccgcttcaacaaggttcagacgcagacattcaacacgctctacaccaca
gacgacaacgctcttgttggcgcagctgcaggtattggcaagaccatctgtgctgagttt
gccatcttgcgacactgggccaccgacaatgagggtcgtatcgtatacctagcaccgttc
caagaactcgtcgacaaccaatacaagaactggaatgagcggttatctggtctcagtgga
ggcaaggacattgtcaagctcactggcgaaaccacggccgatctccgattgctcgagaag
ggagacctcatcttggctacaccttcacaatgggattccctctctcgccagtggcagcgc
aggaagaatgttcaatcgatagctttgctgattgctgatgagctgcatatgcttggtggt
tcaaacggccatgtctatgagattgtcgtctctcgtatgcaggcaatggcgacacaaatt
gagtccaagctgcgcattataggcctggctgtctctctggcaaatgcacgtgacattggc
gagtggatcggcgcgaccaagcacactatctacaactttagcccggctattcgagcagtg
ccattggagctgaaaattcagtctttcaccatcccccatttcccatccttgatgatggct
atggcgaggccgacttactctgccatcacacaaatgtctcccgacaagccggctatggta
ttcgttcctaacaggaaacaagcccgaagctccgcttctgatctcttcaacgcttgcatt
gccgacgagaacgaggatcgcttccttaatgttgacctgacggagattcagcccatcctc
gagaagatcaacgagcactcgcttgcggagtctctgtctcacggtattggctacttccat
gaggctctcaacactttcgacaagcgggccgtccagcatctgttcaaggttggtgctgta
caagttctgattgtgtcacgcgattcctgctgggaggttgacagcagcgctcatctggtc
gttgttcagggcactcagttctatgagggacgcgaacaccgataccgggattaccccatc
agtgacatcctgcagatgtttggcaaagctggtagagtcggagtggacaagtcggccaag
ggtgtgcttatgcttcccgcggtcaagcgcgagtactacaagaagttcttgaacgaggca
ttgcctatcgagagtcatcttccagattacctccatgatgcctttgtcgccgaaatcagc
gcaaagacgatcgaatccacgcaagaggctgtcgactggtcaacgtacacatacttctac
cgccgtctgctagccaaccctagctactacaacctccacagcacgtcgcacgagggcctc
agcgcgcatttgtccgacatggttgagcagacgctgaaggagctgacggaagcccagctg
atcgagcacgatgaggacgaggactctatcacccctctcaacccatgcatgatcgccgcg
tactacaacatctccttcattaccatgcagactctgatgatgtctctcaacggaaggacg
agcttgaagggtgtactggagattatcactgccgccaccgagtttgaggatattcaaata
cggaggcatgaggaccatatcctacagcgcatctacgaccgcgttcctttcaagatggct
gaacccaactttgagacgccacatttcaaggcttttgtcttgctgcaagctcacttctca
cgcatgcaactcccgatcgatctggccaaagaccaagaaactgtgctgcgaaaagtgctc
aacatcctcagtgccagtgtcgatgtcctctcatccgaagcccatctcaatgccatgtcc
gccatggagctctcacagatggtcgtgcaagcaatgtggcaaaaggactcaccactcaag
caaatcccccacttcgacgccgacacgatcaaggcggcgcagaaattcgacattaatgat
gtcgatgacttcatcaatgccatggatcccgacgagaacccagactacaagaagctcatt
gcggccctggatgtcgaccaacgccaactcgccgacattgcaaacttcacaaataacttc
taccccaacgtcgagcttgagctgcaacttgtcgatccagaaaatattgcctccaactca
cccgcacagctcaaagtccgcgtcacgcgcaacatcgaggaggatgaggaacttaagact
gaagtccacgcgccgttctatcctgccgataagacggagagctggtggctcgttgtcggt
gaccagaaggaacgcacactgttggctatcaagaaggtgcctatcctgcgcaagctggaa
accgtactcgagttcacgctggagaagcccggcaagcatgagttgaactgctatcttgtt
agtgatagttatcttggcgtggatcaggccccgccatttacggtggatgcggccgagggc
atggaggaggatagtgaggaggaggaagatgaagaggatgaggatgttaaggatgtgaag
cctgcgatttga
DBGET
integrated database retrieval system
