Pyrenophora teres: PTT_15436
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Entry
PTT_15436 CDS
T01613
Name
(GenBank) hypothetical protein
KO
K12879
THO complex subunit 2
Organism
pte
Pyrenophora teres
Pathway
pte03013
Nucleocytoplasmic transport
pte03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pte00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PTT_15436
09122 Translation
03013 Nucleocytoplasmic transport
PTT_15436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pte03019
]
PTT_15436
03041 Spliceosome [BR:
pte03041
]
PTT_15436
Messenger RNA biogenesis [BR:
pte03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
PTT_15436
Spliceosome [BR:
pte03041
]
Complex C
Other components
EJC/TREX
PTT_15436
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
PTT_15436
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
THOC2_N
Tho2
Thoc2
VF_A0006
Motif
Other DBs
NCBI-ProteinID:
EFQ88618
UniProt:
E3S073
LinkDB
All DBs
Position
Unknown
AA seq
2220 aa
AA seq
DB search
MAPLPKRKRNDRTYSQEEERNGRPSPHRPQSLGLAHQQQNSPRGGGGGGRRQSRNNGRGG
TSSVPQSPSVSHASPTAMSPPANPFPSTRPSQPAPSAPALVTAPPATRPSTPSSLRDVPE
SNEYLTPDRVAHWNGQARDAVVKAATSAQADGDALTLAVIFHEIIEASMRSLLDAGELGS
IVRDIVSAPSNDLVDPVSTFLDTLGSLTQDEGKQALVRQMLVATDIDLTRMRSELENDLL
KSLGLVRDSFNKMAVRKATHALYRQSNYNLLREESEGYSKLMTEYFTTVNSEPPTQEVVS
ETYQRVNALIGAFDLDIGRVLDVTLDVFASLLVKHGKFFVKMLRMSAWWPQLRGFDGIEW
EEPEVPTLPRWAQPDSKQWYYSEQEKEEQLRLRESRDRKFWQRVGELGDRAGVQAFFELG
ARRITANKRQPDQTLPAEGAALSKQQAARKWADDWMEQTKTLPPPGNDIAAQLLGFKLQF
YASDSRDVGDNLPENLMYLIALLIKIGFISILDLYPHLYPLEEDMPAHKEKLFKAKRQKE
EQEGGTALNALTMAGALPDDTPGQPAVSRLRDAESRSKSDSGRTTPAKPDESGDKNKDLP
EARDQKYTLLKSLLCIGALPEALFILGRHPWFLEVYPDLLDLIFRLAHHSLSKVYEAARP
TSVERPFTATKGAGVRGPSKPNDFVPRRPLRWAKADTKDMDGGIDYKFYWEDWVDNVPVC
QEVDDVMKLCSTLLGLVGAECGKDAVLLTKIVRIGNKSLADDPSAANRKRWINFSTTFIA
PAITFTGRNPAVINEVWDLFKSFDTATRYTIYQQWFSGILKPAVKTAFQKIQVETRQTLS
RISATNTKDYGRKIAKISHASPGIVFERTVKQLVNYPNMINVLVECSRYLTLLGYDVLTW
TLVTYLRNPNKGSQQDDGMLSAPWLKNIATFVGRVYAEYRLMDATPVLQLIAHQLLCSEG
ELYMLDVLEQMVKSMGGISFSGSVSESMTLALSGGPQLRTFILSHRLADDRHKAGVPARR
LIKWLKETGLGPQILIALAQHVEAYVHREDQQDVPDKPVLFNVDKLRSNLLHFLELLRAY
ISVDEFDAIFPSLIEMMAEFHVEPDVAFTIARASIATKASAFRAAQRTKLITDNETNGDT
PMDGVENSSLANGAGPADAKTAEDVEMKDPVPSTDAVTGEGDAAASTVAQQDRPDVPNLE
IEKLASQLKQHMPDTFGQHPCLSFYITFWQLSLRDVDIDGINQQYKETIEYLERRIPAPP
PERRGGYRPNVPKPDTAEVRNAKAEIAQLREEQQVFIKAKVATQDSLRAELGQWFDSVPM
IGAQCDALHNALLQDCFIPRSRMSLEDAQYASSMLMFMHSSGVPGFRMSRLLDVLFNSNR
LMAMISMYTEGEASSFGRFLSDILRELQIWYTNKNDAYVKNAHGPQQNLPGFGRSYNAER
NATTFFSYEHFCMVLFKWHRALTTALKTCLESGSYMQMRNAINVLHALGGTFPKVVTLGT
ELKQTIQALVETEEREDLKKALQSILGPVTKGEKSWIEEHVFRNTTAPTPAPGSTTNGSD
KAAPEKGKTPQPHDSRPNATALAFNPKSEPNGTQRTPARADDNGSKRGVPNPGTPAPPRD
REPIQSSRLSEARPSTPSQQENGTGRSTSKPGPPMHPSSVPPRPDSRNTPTQPTSVGRPS
HALPSRPDTQPSRTRQPERPLTERPLEGGHSRYDNRGHPAEYGRLDRSGDPARQREASPG
RRTRLPGGRTPERMPAGADHREWSGRERDYEDRALRAMPRDTRAPPVRPPPTWDPRDARD
PRDTRDPRDPRDQRERSEPRGHAPLPIMDARRMPSNSSLANEYRRDGPPTNASYGSEQND
RHSRAPPGPIPAKEEPTVNPARAALINQVEHGRHEPPRSDRDSRREREPRLNSPRHGEDR
RDDARQLDDRPPSYHGRSEVPREVRDERPIPPPSGNRDRREEPAASAPTGPRSGRNESSS
SRASREMFQPASGPRSSSHQVQDPNYGRLNQPSEPAPPSGPRSDRPHSQPQPPTPTAPTG
PAASLPAGIHPSRLVNIEGRPPSGPPLQTNIPNAPSGPRGSNRAPQGPIPSSPGGRGPPT
GPAAADRGSRNAGNPLRAINNVLTGNAPAERSNERVVPPPNPPVRGRGASRANGPVEGSG
SMPSPMPPPPHASTPNRVENQHPRSSRNDEIPTRPDGIPLEEGRSESRSHRDSRRSERSG
NT seq
6661 nt
NT seq
+upstream
nt +downstream
nt
atggctcccctgcctaagcgaaagcgaaacgatcgcacctactcacaagaagaggagcgc
aatggacggccgtcaccgcatcgcccgcagagcctcggactcgcgcatcaacagcagaac
agcccgcgcggcggcggtggaggcggtaggcgccagagcagaaacaacggacgcggcggc
acatccagcgtacctcagagtcccagcgtgtcgcatgcttccccaacagccatgtctcca
cccgcaaacccgttcccgtcgacaaggccatcgcagccagcaccttctgcgcctgcgctc
gtgaccgcgccgccagccacacgaccctcgacgccctcttcactgcgcgacgtccccgag
agcaatgagtatctgacaccggaccgcgtcgctcactggaatggccaagcacgcgatgct
gtagtgaaggctgccacatccgcccaggcagacggcgatgcgctcacgctggcagtaata
tttcacgagatcatcgaagcgtccatgcgcagcctattggatgctggcgagctgggatcg
atagtccgcgacatcgtttctgctccttcaaacgacctagtggaccccgtatcgacgttc
ctcgacacgctgggttcgctcacacaagatgagggcaaacaagcgcttgtacggcagatg
cttgttgcgaccgacatcgacttgacgcgcatgcgctccgagctggaaaatgatctcctc
aagtctttgggcctggttcgcgacagcttcaataagatggcagtgcggaaagcaacacat
gccttgtatcgacagtccaattacaacctgctacgcgaggagagcgaaggctactctaag
ctcatgactgagtactttaccacagtaaacagcgaaccgcctacacaggaagtcgtgagc
gagacatatcagcgggtaaacgcactcatcggcgcattcgatctggacattggcagagtc
ctcgatgtgaccctggatgtgtttgccagccttctcgtcaagcacggaaagttctttgtc
aaaatgctacggatgagcgcctggtggccccaattacgcggctttgacggcattgagtgg
gaagaacccgaagtaccgaccctgccccggtgggcgcaacccgactcgaagcaatggtac
tattccgaacaagaaaaggaagagcaactacgattacgagaatcgcgagatcggaaattc
tggcaacgagtcggcgagttgggtgaccgggcgggcgtacaggcctttttcgagcttggc
gcacgtcgcatcactgccaacaaacgacagccagaccagacactacctgccgagggtgct
gcgctatccaagcaacaagctgctcggaagtgggctgatgattggatggagcagaccaag
acccttccccctcccggcaacgacatcgcagctcaactgcttggcttcaagcttcagttc
tatgcctcggacagtcgcgatgttggggacaatctcccagagaatctcatgtatctgatc
gcactcctgataaagattggattcatctccatcctagatctatatccacatctataccca
ttagaagaggatatgcctgcacacaaggagaagctcttcaaagccaagaggcaaaaggag
gaacaggaaggaggaacggctcttaatgcgcttactatggccggtgcattgcccgacgat
acacctggccaaccagctgtttctcgtctcagggatgccgagagtagatcgaagtcggac
agcgggcgcactacgcctgccaaacccgacgagtccggcgataagaataaggatctaccg
gaagctagagaccaaaagtacacgttgttgaagagtctgctatgtattggtgcactcccc
gaagcattgttcattcttggacgtcatccgtggtttctcgaagtctaccctgacctgctg
gaccttatcttccggctggcacaccactctttgagcaaggtctacgaagccgccagaccc
acttcggttgagcgtccttttaccgctaccaagggagccggtgtccgcggaccctcaaaa
ccaaatgacttcgttccccgacggcctcttcgatgggcaaaagctgatacaaaggacatg
gatggcggaatcgactacaagttctattgggaggactgggtagacaatgttcccgtatgc
caagaggtggacgatgtaatgaagctctgctccactcttctaggcttggtgggggcagag
tgcggcaaggatgccgtgctcttgaccaaaattgtacgcattggcaacaagagcttggct
gatgacccctcggccgcgaatcgaaagcgatggatcaacttctcgacgacctttatagcg
cccgccatcaccttcactggtcggaatcctgccgtcattaatgaggtgtgggatctattc
aaaagtttcgacaccgcaactcgatataccatctaccagcagtggttcagcggaatactc
aaaccagcggttaagacggctttccagaaaattcaggtcgagaccaggcaaacgctgagc
cgaatttctgcaacgaacacaaaggattacggccgtaagatcgcaaagatctcacacgcc
agtcccggaatagtctttgagagaacggtcaagcaactcgtcaactatcccaacatgatc
aacgtcttggtggagtgcagtcgataccttaccctacttggatacgacgtcttgacctgg
accttggttacataccttcgcaaccctaataaaggctcacaacaagatgacggcatgctt
tctgcgccatggctcaagaacattgctacctttgttggtagagtttacgcagaataccgc
ctcatggatgcaacgcccgtcctgcagctgattgcgcatcaacttctgtgctcagaaggc
gagctctatatgttggatgtccttgagcagatggtcaagtccatgggtggtataagcttc
agtggatctgtgtctgagtctatgactctggcgcttagtggtggacctcagctccgcacc
tttatcctgtctcatcgtctggccgacgatcgtcacaaagctggcgtcccagcaagacgt
cttatcaagtggctaaaagagacgggtctcggcccccagatactcatcgcactagcacaa
cacgtggaggcttatgtccaccgcgaagaccagcaagatgtgcccgacaagcctgtgctc
ttcaacgttgacaagctacgctcaaacctgcttcactttctggaacttcttcgcgcgtac
atctctgtggatgagtttgacgccatcttcccttcactgatcgaaatgatggcggaattc
cacgttgagccggatgtcgccttcaccattgctcgtgcgagcatagcaaccaaagctagc
gcattccgagctgcgcagcgcacgaagctcatcactgacaatgagacaaacggtgacaca
cccatggatggtgttgaaaattcgtcacttgcaaatggagccggccctgctgatgccaag
actgcggaagatgtggagatgaaagacccggttccgtctacagacgctgttacgggagaa
ggagatgcagccgcgtctaccgtcgcacaacaggacaggcccgatgtgcccaaccttgag
atcgaaaaactggcgagccaactcaaacaacacatgccagacacctttggccaacatcca
tgcttgtctttctacattactttctggcaactttctttacgcgatgtcgacattgacgga
atcaatcaacaatataaggagacgatcgaataccttgagcgacgaatcccagctcctccg
ccggagcgacgtggaggttacagacctaacgtgcctaaacctgacacggctgaagtccgc
aatgccaaagctgaaattgctcaacttcgtgaagaacagcaagtcttcatcaaagcgaaa
gttgctacacaagacagtttacgagctgaacttgggcaatggtttgacagtgttcctatg
atcggagcacagtgcgacgccttgcacaatgccttgcttcaagactgcttcattccccgc
agtcgcatgtcgctggaagatgcgcaatatgcgtcatccatgctcatgtttatgcatagc
tcaggagtacctggattccgcatgagcaggttactggacgttctcttcaactccaacagg
ctcatggctatgattagcatgtacacagaaggagaggcttcatccttcggccgattcctg
agcgacatactgcgggaacttcaaatctggtatacgaataagaatgacgcttatgtgaag
aacgcacatggtccacaacagaacctgcccggctttggaagaagctataacgcagagcgg
aacgcgaccacgttcttctcttacgagcatttctgtatggtcttgtttaagtggcacagg
gcattgacaactgcgctcaagacctgtctggagagtggcagttatatgcagatgcgcaac
gctatcaatgttttgcatgctctgggcggtaccttccccaaggtcgtaactctgggcacg
gagctcaaacaaacaatccaggctttggtagaaaccgaggagagggaggatctcaagaag
gcactacaatccatactaggaccagtcaccaaaggagagaagtcatggatagaagagcat
gtattccgcaacacaacggcaccaacacctgcacccggaagcacgaccaatggaagcgac
aaagctgctccagaaaagggcaagacgccacagccgcatgattcaagacccaatgcgact
gcactggcctttaatccgaaatctgaacccaacggaacccagcgaacgccagcacgagcg
gacgataacgggtcgaagcgcggtgttccaaaccctggaactcctgctcctccaagagat
agagaaccaattcagtcttcaagactttctgaagctaggccatcgactccttcacagcag
gagaacggcactggtagatccacgtccaaaccgggcccaccgatgcatccgtcttctgtt
ccaccacgcccggacagtagaaacacgccaacccagcccacttcagtcggcaggccatcg
cacgctctaccatcgcgaccggacacgcaaccgtcaagaacgcgacagcctgagcgacct
ctcactgagcgacctctcgaaggcgggcacagtcgctatgataacagaggtcacccagct
gaatatgggcgattagatcgctccggagatcctgcacgccagcgtgaggcatcgcccggc
cgacgtacgcggctgcctggtggcaggactcccgagagaatgcctgcaggtgccgaccat
cgcgaatggtctggaagagaaagggattatgaagatcgggctttacgagcaatgccgcgg
gatacacgagcgcctccagtacgaccaccacctacttgggacccacgtgacgctagagat
ccacgtgatacgagggacccacgggatcctagggatcaacgtgaacgttctgagcctcga
ggccatgctccgcttccaataatggacgctcggcgcatgccgtccaactcatcactggcc
aatgaataccggcgagatggaccgcctacgaacgcttcttacggctcagaacagaacgat
agacattcgcgagcacctccagggccaattccagccaaggaagagcctacggttaaccct
gcacgcgctgcactgatcaaccaagtcgagcatgggagacatgaaccaccaaggtctgat
cgtgacagccgtcgtgagagagaacctcgtctgaattcgccccgtcatggcgaagatagg
cgtgatgacgctcgtcagctcgacgatcgtccacccagttatcatggacgaagtgaagtg
ccacgcgaagttcgagacgagcgccccatccctccaccatctgggaaccgagaccgacgg
gaggaaccagcagcaagcgcacctaccggaccccgcagtggacgcaatgaatcttcatct
tctcgcgcatcccgagagatgttccaacccgcatccggtccacggtcatccagtcaccag
gttcaggatcccaactacgggagattgaaccaaccttctgagccagcaccgccatccggc
ccacgcagtgatagaccgcattcacaaccacaacctcctactcctactgcacctaccggg
cctgcagcatctttacctgcaggcatccatcctagtagactggtgaacattgagggcaga
ccacccagcggaccaccactccagaccaacatacccaacgctccaagcggcccgcggggc
tctaacagggcacctcaaggtcctattccatcttctcctggtggtcgggggccacccaca
ggacctgccgctgccgaccgtggatcaaggaacgccggaaaccctctccgagccatcaat
aacgtcttaactggaaatgcgcctgctgaacgatcaaatgagcgggttgtaccacctccc
aaccctccggtgcgcggtcggggtgcaagccgagccaacggtcctgtggaagggtcaggc
agtatgccaagccccatgccaccgccaccgcacgcatcaacacccaaccgtgttgagaac
caacatcctaggagcagtcgaaatgacgaaatcccgaccaggccagatggcattcccttg
gaggaaggtcgctccgagtcgcgcagccatagggatagcagacgtagcgagcgatcagga
c
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