Pyrenophora teres: PTT_15850
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Entry
PTT_15850 CDS
T01613
Name
(GenBank) hypothetical protein
KO
K14829
pre-rRNA-processing protein IPI3
Organism
pte
Pyrenophora teres
Brite
KEGG Orthology (KO) [BR:
pte00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pte03009
]
PTT_15850
Ribosome biogenesis [BR:
pte03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
PTT_15850
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_TEP1_2nd
WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_VPS8
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_EML
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_IP5PC_F
Beta-prop_RIG_2nd
Nbas_N
Beta-prop_Vps41
Beta-prop_WDR41
WD40_MABP1-WDR62_1st
Beta-prop_ACSF4
Beta-prop_LRRK2
Beta-prop_WDR19_1st
NBCH_WD40
CC_Bre1
Beta-prop_IFT122_1st
Gryzun-like
Cep57_CLD_2
DivIC
Motif
Other DBs
NCBI-ProteinID:
EFQ88328
UniProt:
E3S135
LinkDB
All DBs
Position
Unknown
AA seq
556 aa
AA seq
DB search
MLTEQFVAAISASTKPNTGVTKDAGIFIHEFQPLVAQRHVFKKSATAPNGVAVSSSHIFA
AQSEKAIVHVYSREKGNQEALVPFPERIHSIALAAQDSVLLLGTESGRILAWEICSGRLV
STSTSHLQPVTCIVVDPSSNFFLSGSSDAMIHVWALPSILSFSPDASRSPIHTLSTHRGP
ISSIACGHSWSSANIAVSISGDKSAIVWDYHNGQALRTYLLQDAPTAVTLDPADRAFYVA
YADGSLQTIDFYDEVQKHTSLDLLRDSVSSHRPIQPSPKTRFSADSQKLGGALSLSLSWD
GTTLISGHTSGKIATWDIAKANYLSTSANLPGPVSNLRFLPPVGFPNTREPSFKIQTIVK
PKQDAGMTSGGNGLIPPNYTLNMQLTGRLHVPHLSATEKRSTGKSAFKEALTHPCFPTDM
LEESLAELDSWNAQTKGGFAPAADFMALDEHGASGSMSSGNAQQAEVKELKKQLASLQRI
QKVTFSQLAELRQEKDYFVRQEKKRADRAKVRAKKNMGLAHNGANHSDAGGDVEMNDCTD
ATSESESDDIDAADES
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgctcaccgaacaattcgtggccgccatctcggcctcgaccaagccaaatactggcgtt
accaaagatgccggcattttcatccacgagttccagccattggttgcgcagagacatgtg
tttaagaagagcgcaactgcgccaaatggcgtcgctgtgagcagctcacatattttcgcc
gctcagtcggaaaaggcgattgtccatgtctatagcagagaaaaaggcaaccaggaagcc
ttggtgccgtttccagaacggatacatagcatcgccctcgcggcgcaggacagcgtgctg
ctgctgggaaccgagagtggacgaatattggcgtgggagatttgctccggtcgcctcgtc
tctacatccacatcccaccttcagccagtaacatgtattgtcgtcgacccctcgtccaac
ttcttcctgtctggttcctcggatgctatgatacacgtatgggccctgccatcgatactt
tccttctcccctgacgcctcacgctcgcctatacatacactttcaacccatcgtggtcct
atatcgtccatcgcctgcgggcacagttggagcagtgccaacattgccgtttcgatttcg
ggagacaagtcggccatagtttgggactatcataacggccaagcgctgaggacatatctg
ctgcaagatgcacctaccgcagtcactcttgatccggcagaccgggccttctacgttgct
tatgccgacggcagcctacagaccatcgacttctacgatgaggtgcagaagcacacatcg
ctcgaccttctccgtgatagtgtgtcgtctcaccgccctatccaaccgtcaccgaagacc
cggttcagtgccgactcgcagaagctgggtggtgcgctcagtctgagtttgagctgggat
ggtacaacattaatatctggccatacaagcggtaagattgcgacttgggacattgcaaag
gccaattatctctctacatctgccaatctaccaggccctgtttcaaaccttcgctttcta
ccacctgtaggcttccccaatacacgggagccaagcttcaagatccagactattgtcaaa
ccaaaacaggatgctggaatgacgagcggcgggaatggcctgatcccaccaaactatacc
ttgaacatgcagctgacaggccggctgcacgtccctcacttatctgccactgagaagagg
tctacggggaagagtgcattcaaagaggctctcacccatccctgctttcctaccgacatg
ctggaagagagcttagccgaattggactcatggaacgcccagaccaaagggggctttgct
ccagcggccgacttcatggcactcgatgaacatggtgcaagtgggtccatgtcgtcaggt
aatgctcagcaagcagaagtcaaagagttgaagaagcagctagccagtctgcaacgcatt
caaaaggtcactttctcgcaattagcggaattgcgccaggaaaaggactactttgttcgc
caagaaaagaagagggctgaccgtgccaaagttcgggcgaaaaagaatatgggcctagcc
cacaatggcgcaaaccatagtgatgcaggcggcgacgtggagatgaacgactgcactgac
gccacctccgagtcagaatcagacgatattgatgcggctgacgagtcttga
DBGET
integrated database retrieval system